Commits · 9e7921c5cd78411f5823d3e53e0e461fe6ec71a5 · medai / software / mednet · GitLab

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Feb 12, 2024
- [test] Remove check of square image · 9e7921c5
  Daniel CARRON authored 1 year ago
  
  Samples are not square cropped during data loading anymore due to recent changes. Cropping is model-dependent.
  9e7921c5
- [test] Add tests for raw data loading image quality · 74d90ccb
  Daniel CARRON authored 1 year ago
  
  74d90ccb
- [test] Test loaded images against reference histograms · 45f95973
  Daniel CARRON authored 1 year ago
  
  45f95973
- [test] Remove comment · 05853dc7
  Daniel CARRON authored 1 year ago
  
  05853dc7
- [test] Remove unused and outdated test samples · 0b119fe9
  Daniel CARRON authored 1 year ago
  
  0b119fe9
- [test] Remove unnecessary padchest test code · 45043ddb
  Daniel CARRON authored 1 year ago
  
  45043ddb
- [test] Add checks for specific image shapes · fb46d403
  Daniel CARRON authored 1 year ago
  
  fb46d403
- [test] Check number of labels per sample in DataLoader · 47239f3d
  Daniel CARRON authored 1 year ago
  
  47239f3d
- [test] Check saliency outputs in experiment test · 4ccefa94
  Daniel CARRON authored 1 year ago
  
  4ccefa94
- [test] Add missing datasets in padchest loading test · 446eebf9
  Daniel CARRON authored 1 year ago
  
  446eebf9
- [test] Rename saliency tests · 740bdbd5
  Daniel CARRON authored 1 year ago
  
  740bdbd5
- [tests] Add tests for experiment · 2ff36c7b
  Daniel CARRON authored 1 year ago
  
  2ff36c7b
Feb 05, 2024
- [doc] Add missing parameters in docstrings · 6176acca
  Daniel CARRON authored 1 year ago
  
  6176acca
- [doc] Add missing "Returns" sections in docstrings · ab0f2f29
  Daniel CARRON authored 1 year ago
  
  ab0f2f29
- [doc] Disable docstring summary wrapping with docformatter · bb828de9
  Daniel CARRON authored 1 year ago
  
  bb828de9
Feb 02, 2024
- [pre-commit] Start fixing numpydoc issues · 3c726c55
  Daniel CARRON authored 1 year ago
  
  3c726c55
Jan 29, 2024
- [test] Update assert · 3240277a
  Daniel CARRON authored 1 year ago
  
  3240277a
- [doc] Various docstring improvements · fe2424b7
  Daniel CARRON authored 1 year ago
  
  fe2424b7
Jan 22, 2024
- [.gitmodules] Fix origin · 9a0c5cbb
  André Anjos authored 1 year ago
  
  9a0c5cbb
- Port saliency map generation/analysis to new name · 87202935
  André Anjos authored 1 year ago
  
  87202935
- Rename package from ptbench -> mednet (closes #46 ) · 3138c707
  André Anjos authored 1 year ago
  
  3138c707
- [tests] Add missing cli test · b46b61b5
  Daniel CARRON authored 1 year ago
  
  b46b61b5
Jan 19, 2024
- [tests] Fix saliency tests · f0facb1c
  Daniel CARRON authored 1 year ago
  
  f0facb1c
- [tests.test_transforms] Rename to fix typo · cef1ef38
  André Anjos authored 1 year ago and Daniel CARRON committed 1 year ago
  
  cef1ef38
- [scripts] Streamline saliency map generation and analysis · 5a314b5c
  André Anjos authored 1 year ago and Daniel CARRON committed 1 year ago
  
  5a314b5c
- [utils.checkpointer] Refactor checkpoint saving and loading · 0152c9c3
  André Anjos authored 1 year ago and Daniel CARRON committed 1 year ago
  
  0152c9c3
- [tests.test_tbx11k] Fix test after bounding-box type fix · a3febdc4
  André Anjos authored 1 year ago and Daniel CARRON committed 1 year ago
  
  a3febdc4
- [config.data.tbx11k.datamodule] Re-define bounding-box containers for better pytorch integration · f0e1e38e
  André Anjos authored 1 year ago and Daniel CARRON committed 1 year ago
  
  f0e1e38e
- fixed formatting · 174f2ccf
  ogueler@idiap.ch authored 1 year ago and Daniel CARRON committed 1 year ago
  
  174f2ccf
- fixed tests · d868062e
  ogueler@idiap.ch authored 1 year ago and Daniel CARRON committed 1 year ago
  
  d868062e
- fixed formatting · 95b658e8
  ogueler@idiap.ch authored 1 year ago and Daniel CARRON committed 1 year ago
  
  95b658e8
- added changes from gradcam branch to add-datamodule · 073cbd66
  ogueler@idiap.ch authored 1 year ago and Daniel CARRON committed 1 year ago
  
  073cbd66
Sep 19, 2023
- [tbx11k] Loads RS bounding-boxes with sample; Add tests for bounding-boxes · 21fc141d
  André Anjos authored 1 year ago
  
  21fc141d
Sep 05, 2023
- fixed pipeline from Commit 0a0e9529 · 0203f7c6
  Maxime DELITROZ authored 1 year ago
  
  0203f7c6
- [test/test_cli] updated unit tests for training, prediction and evaluation cli... · 0a0e9529
  Maxime DELITROZ authored 1 year ago
  
  [test/test_cli] updated unit tests for training, prediction and evaluation cli scripts. Removed radiological signs (rs) related tests
  0a0e9529
Aug 18, 2023
- [tests] Remove tests for ptbench compare for now · d606f37e
  André Anjos authored 1 year ago
  
  d606f37e
- [scripts] Remove outdated aggregpred and predtojson scripts and associated tests · 01ae2cbb
  André Anjos authored 1 year ago
  
  01ae2cbb
- [tests] Fix testing · 222e8515
  André Anjos authored 1 year ago
  
  222e8515
Aug 08, 2023
- [cli] Refactor config and database (old datamodule) commands · 42f89749
  André Anjos authored 1 year ago
  
  42f89749
Aug 06, 2023
- Re-shuffle datamodules to the "config" base directory, adjust tests and documentation · b550794f
  André Anjos authored 1 year ago
  
  b550794f