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    • Amir's avatar
      Merge pull request #7 from bioidiap/183amir-patch-2 · 49da5d1a
      Amir authored
      'extracted' is the correct name not 'features'
      49da5d1a
    • Amir's avatar
      'extracted' is the correct name not 'features' · 86eafbea
      Amir authored
      The error I was getting while using the bob.bio.base verify.py script before
      this commit. My invoke command was:
      
      ```
      'bob.example.facevoice/bin/verify.py' -vv --grid 'grid' --preprocessor 'inorm-lbp-cro p' --extractor 'grid-graph' --algorithm 'gabor-jet' -d 'mobio-male' --zt-norm --groups 'eval' --sub-directory 'baselines/gabor-graph' --sub-task 'compute-scores' --group 'eval' --score-type 'C'
      ```
      
      the error:
      
      ```python
      bob.bio.base@2016-03-09 14:36:22,159 -- ERROR: During the execution, an exception was raised: The given directory type 'features' is not supported.
      Traceback (most recent call last):
        File "/home/miniconda2/envs/bob.example.facevoice/bin/verify.py", line 6, in <module>
          sys.exit(bob.bio.base.script.verify.main())
        File "/home/miniconda2/envs/bob.example.facevoice/lib/python2.7/site-packages/bob.bio.base-2.0.5-py2.7.egg/bob/bio/base/script/verify.py", line 435, in main
          verify(args, command_line_parameters)
        File "/home/miniconda2/envs/bob.example.facevoice/lib/python2.7/site-packages/bob.bio.base-2.0.5-py2.7.egg/bob/bio/base/script/verify.py", line 382, in verify
          if not execute(args):
        File "/home/miniconda2/envs/bob.example.facevoice/lib/python2.7/site-packages/bob.bio.base-2.0.5-py2.7.egg/bob/bio/base/script/verify.py", line 338, in execute
          write_compressed = args.write_compressed_score_files)
        File "/home/miniconda2/envs/bob.example.facevoice/lib/python2.7/site-packages/bob.bio.base-2.0.5-py2.7.egg/bob/bio/base/tools/scoring.py", line 273, in compute_scores
          _scores_c(algorithm, t_model_ids, group, force)
        File "/home/miniconda2/envs/bob.example.facevoice/lib/python2.7/site-packages/bob.bio.base-2.0.5-py2.7.egg/bob/bio/base/tools/scoring.py", line 163, in _scores_c
          probe_files = fs.get_paths(probe_objects, 'projected' if algorithm.performs_projection else 'features')
        File "/home/miniconda2/envs/bob.example.facevoice/lib/python2.7/site-packages/bob.bio.base-2.0.5-py2.7.egg/bob/bio/base/tools/FileSelector.py", line 103, in get_paths
          raise ValueError("The given directory type '%s' is not supported." % directory_type)
      ValueError: The given directory type 'features' is not supported.
      ```
      
      `jman list` output:
      
      ```
      $ jman list
       job-id         grid-id             queue           status            job-name                   submitted command line          
      ========  ====================  ==============  ==============  ====================  ===========================================
         1        533393 [1-32:1]         all.q        success (0)         enr-N-eval       '/home..
         2        533394 [1-32:1]         all.q        success (0)         enr-T-eval       '/home..
         3        533395 [1-32:1]         all.q        success (0)        score-A-eval      '/home..
         4        533396 [1-32:1]         all.q        success (0)        score-B-eval      '/home..
         5        533397 [1-32:1]         all.q        failure (1)        score-C-eval      '/home..
         6        533398 [1-32:1]         all.q        failure (1)        score-D-eval      '/home..
         7             533399           extatix08      failure (1)        score-Z-eval      '/home..
         8             533400           extatix08      failure (1)        concat-eval       '/home..
      ```
      86eafbea
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