Commits · a8c1a1ba36147cd8f23961c5a211cca132d47756 · medai / software / mednet

May 28, 2024
- Update reference to batch accumulation flag. #69 · a8c1a1ba
  Gokhan OZBULAK authored 10 months ago
  
  a8c1a1ba
May 24, 2024
- Fix qa #69 . · ce314d56
  Gokhan OZBULAK authored 10 months ago
  
  ce314d56
- Add more train info into experiment table and relocate trainlog.pdf path. #69 · e37b31d5
  Gokhan OZBULAK authored 10 months ago
  
  e37b31d5
May 22, 2024
- [engine.callbacks] Be more specific about the type of missing logs · 5104b614
  André Anjos authored 10 months ago
  
  5104b614
- [scripts.train_analysis] Add indication of lowest validation loss epochs on loss plots (closes #70 ) · 0aadc7ea
  André Anjos authored 10 months ago
  
  0aadc7ea
May 03, 2024
- [trainer] Hardcode name of loss to monitor · 236447ec
  Daniel CARRON authored 10 months ago
  
  236447ec
- [logging] Prevent PL from adding dataloader index to logged metrics · ae55d184
  Daniel CARRON authored 10 months ago
  
  ae55d184
- [model] Use a single type of loss for train and validation · 8769c327
  Daniel CARRON authored 10 months ago
  
  8769c327
- [model] Fix detection of binary targets in loss balancing · 28a261b0
  Daniel CARRON authored 10 months ago
  
  28a261b0
- [model] Model takes loss type and arguments during instanciation · ea69e431
  Daniel CARRON authored 10 months ago
  
  ea69e431
- [model] Fix balancing of multiclass targets · 1f0e3938
  Daniel CARRON authored 10 months ago
  
  1f0e3938
- [train] Add support for multiple validation dataloaders · 222a3762
  Daniel CARRON authored 10 months ago
  
  During validation logging, lightning seems to append "/dataloader_idx_n" to the key we define if multiple dataloaders are used.
  222a3762
- [train] Use loss balancing instead of sampler balancing · 51b5d6f7
  Daniel CARRON authored 10 months ago
  
  This currently only supports a single validation dataloader
  51b5d6f7
- [model] Use base model · 5fae86b8
  Daniel CARRON authored 10 months ago
  
  5fae86b8
- [model] Create base Model class · 21937fb2
  Daniel CARRON authored 10 months ago
  
  21937fb2
May 02, 2024
- [scripts.utils] Sort dependence names · 94313ec4
  André Anjos authored 10 months ago
  
  94313ec4
May 01, 2024
- [scripts.upload] Make uploaded data a bit more obvious; Report size of... · fb218b8d
  André Anjos authored 10 months ago
  
  [scripts.upload] Make uploaded data a bit more obvious; Report size of uploaded material; Report URL of uploaded model/experiment; Move gitlab functions to dedicated module; Document dedicated module; Fix QA
  fb218b8d
- Remove try/catch block for auth, no need it #60 . · 81c1976a
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  81c1976a
- File limit flag is added #60 . · 74004ef1
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  74004ef1
- Add auth check before start uploading. · 505a1690
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  505a1690
- Import modules when necessary #60 . · 2342783d
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  2342783d
- Delete temp model file after it's done #60 . · 6c90cee3
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  6c90cee3
- [test] Update paths · aa7d5a67
  Daniel CARRON authored 11 months ago and André Anjos committed 10 months ago
  
  aa7d5a67
- [results] Hardcode trainlog and evaluation file names · 0e198fc4
  Daniel CARRON authored 11 months ago and André Anjos committed 10 months ago
  
  0e198fc4
- Change flag for experiment path for better intuition. #60 · 014bcf0b
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  014bcf0b
- Make function names private and more clear, #60 · 1a40cff4
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  1a40cff4
- Modified comments for better qa #60 · 932109a4
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  932109a4
- Experiment functionality is added for #60 . · e583c8b9
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  e583c8b9
- Handle model filename with different characters for MLFlow · b8268a0e
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  b8268a0e
- Fix qa issues regarding to os usage #60 · 8bea5d31
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  8bea5d31
- Modified comments for better qa #60 · f759270b
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  f759270b
- Fix no EOL issue for qa #60 · 46bbccfa
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  46bbccfa
- Experiment functionality is added for #60 . · e7aefd95
  Gokhan OZBULAK authored 11 months ago and André Anjos committed 10 months ago
  
  e7aefd95
Apr 30, 2024
- [Densenet] adding drop_rate in model params · 854a730e
  Oscar JIMENEZ authored 10 months ago
  
  854a730e
Apr 22, 2024
- [scripts.utils] Improves dependency finding · d30cd43e
  André Anjos authored 11 months ago
  
  d30cd43e
Apr 21, 2024
- [doc] Improve documentation with pixi examples · de4500dd
  André Anjos authored 11 months ago
  
  de4500dd
Apr 18, 2024
- [engine.callbacks] Be more selective about samples we aggregate/log · 480e3a9a
  André Anjos authored 11 months ago
  
  480e3a9a
- [engine.callbacks] Use a single resource monitor for both training and validation · 4605aba4
  André Anjos authored 11 months ago
  
  4605aba4
- [utils.resources] Fix start() object recognition · dea03959
  André Anjos authored 11 months ago
  
  dea03959
- [utils.resources] Improve start/stop methods to avoid contention · 667aedee
  André Anjos authored 11 months ago
  
  667aedee