[qa] Autoupdate pre-commit and apply on all files.

.pre-commit-config.yaml

src/bob/pipelines/dataset/database.py

src/bob/pipelines/distributed/sge.py

src/bob/pipelines/wrappers.py

src/bob/pipelines/xarray.py

tests/test_samples.py

tests/test_utils.py

tests/test_wrappers.py

tests/test_xarray.py