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Created with Raphaël 2.2.01Jul28Jun26242113107432129May282524228732130Apr2922212019181716854229Mar21191817161413118765128Feb272624222019161413129875229Jan242322191722Dec141319Sep518Aug17161514865432131Jul30282726[segmentation] Add train-analysis command[datamodule] Apply model transforms on TVTensors[lwnet] Common loss for train and validation[model] Balance loss on train DataModule if no validation one[normalizer] Ensure targets are int type[tests] Update tests[cli] Fix info command[lwnet] Add parameter for crop size[script] Move config and database scripts to common lib[scripts] move training and prediction scripts to common packge[segmentation] Add base code from deepdraw[datamodule] Use train split if no validation split available[mednet] Start reorganizing into monorepo[logging] Hardcode logger names[utils] Fix import[common] Move reusable files to new common packageMerge branch '3d-cnn-visceral' into 'main'[models] remove pasa3d code[models.cnn3d] fix qa.[models] add skip connections to cnn3d[helpers] add script to split data for visceral dataset[helpers] add comments and ensure qa compliance[helpers] add script to preprocess visceral datasetFix qa.[pyproject] define 3d models, visceral datamodule and add torchio[models] add an 3d adaptation of cnn by pasa[models] add first version of a basic 3d cnn[tests] add basic tests for visceral datamodule[config.data.visceral] add datamodule for visceral datasetMerge branch 'msit_test' into 'main'[pre-commit] Pre-commit fixes[tbx11k] Add parameter to avoid returning bounding boxesTest batch uniformity for combined datasetsMerge branch 'fix-documentation' into 'main'[doc] fix documentation job by using numpy 1.26 instead of stable in sphinx[pyproject] Fix conda-pypi mapping for pytorch/torchvision (required since pixi-0.24.*v1.0.0b0v1.0.0b0Merge branch 'solve-elastic' into 'main'[data.augmentations] Remove elastic deformation parallelisationMerge branch 'move-all-to-device' into 'main'[models.model] Only move transforms that have the "to()" method implemented