Make square centre-padding a model transform
This MR fixes issues #23 (closed) and #39 (closed), by:
- Removing centre-cropping from all databases raw-data loaders
- Creating a SquareCenterPad transform that operates on tensors
- Adding that transform to all relevant models (Pasa, Alexnet, Densenet)
Edited by André Anjos
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assigned to @andre.anjos
@dcarron: any commits to this one after rebasing to the doc changes?
added 36 commits
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44aa532c...43a9c8d1 - 34 commits from branch
main - d43b2c49 - [config.data.*] Remove center_crop from all raw data loaders to avoid lung cropping (closes #23 (closed))
- 5e5f5b8a - [models] Apply square-center-padding on all relevant model transforms (closes #39 (closed))
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44aa532c...43a9c8d1 - 34 commits from branch
added 3 commits
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22fec22f - 1 commit from branch
main - 1a54dbf4 - [config.data.*] Remove center_crop from all raw data loaders to avoid lung cropping (closes #23 (closed))
- d2d83ca3 - [models] Apply square-center-padding on all relevant model transforms (closes #39 (closed))
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22fec22f - 1 commit from branch
added 38 commits
- 2b40fbd6...147da72b - 28 earlier commits
- b3c629ab - [conda] Add grad-cam to run requirements
- 117d75e0 - [test] Remove commented cli tests
- 29312e48 - [conda] typo
- ce12edba - [gitlab-ci] Add missing libgl package when building in docker
- d93a4ec7 - [gitla-ci] Add missing reference
- 53c39706 - [gitlab-ci] Install git in overriden before-script
- f6342125 - [engine.saliency.viewer] Fix --show-groundtruth
- 65d19eaa - [ci] Modify conda-package stage to add libGL install (required by opencv)
- 1c9ce4ba - [meta.yaml] Max pin the grad-cam package
- ce135a5d - Merge branch 'update-tests' into 'issue-23-and-39'
Toggle commit listenabled an automatic merge when the pipeline for ce135a5d succeeds
mentioned in commit 09ca9f9a
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