[tests] Update tests

6dc6aa6a · Daniel CARRON · André Anjos · 2e8c52e9 · 6dc6aa6a · 6dc6aa6a
Commit 6dc6aa6a authored 10 months ago by Daniel CARRON Committed by André Anjos 8 months ago
--- a/.gitmodules
+++ b/.gitmodules
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -476,7 +476,7 @@ convention = "numpy"

 [tool.ruff.lint.per-file-ignores]
 "helpers/*.py" = ["T201", "D103"]
-"tests/*.py" = ["D", "E501"]
+"**/tests/*.py" = ["D", "E501"]
 "doc/conf.py" = ["D"]
 "**/scripts/*.py" = ["E501"]


--- a/tests/data/histograms/models/histograms_alexnet_montgomery_default.json
+++ b/tests/data/histograms/models/histograms_alexnet_montgomery_default.json
--- a/tests/data/histograms/models/histograms_densenet-121_montgomery_default.json
+++ b/tests/data/histograms/models/histograms_densenet-121_montgomery_default.json
--- a/tests/data/histograms/models/histograms_pasa_montgomery_default.json
+++ b/tests/data/histograms/models/histograms_pasa_montgomery_default.json
--- a/tests/data/histograms/raw_data/histograms_hivtb_fold_0.json
+++ b/tests/data/histograms/raw_data/histograms_hivtb_fold_0.json
--- a/tests/data/histograms/raw_data/histograms_indian_default.json
+++ b/tests/data/histograms/raw_data/histograms_indian_default.json
--- a/tests/data/histograms/raw_data/histograms_montgomery_default.json
+++ b/tests/data/histograms/raw_data/histograms_montgomery_default.json
--- a/tests/data/histograms/raw_data/histograms_montgomery_preprocessed_default.json
+++ b/tests/data/histograms/raw_data/histograms_montgomery_preprocessed_default.json
--- a/tests/data/histograms/raw_data/histograms_nih_cxr14_default.json
+++ b/tests/data/histograms/raw_data/histograms_nih_cxr14_default.json
--- a/tests/data/histograms/raw_data/histograms_padchest_idiap.json
+++ b/tests/data/histograms/raw_data/histograms_padchest_idiap.json
--- a/tests/data/histograms/raw_data/histograms_shenzhen_default.json
+++ b/tests/data/histograms/raw_data/histograms_shenzhen_default.json
--- a/tests/data/histograms/raw_data/histograms_tbpoc_fold_0.json
+++ b/tests/data/histograms/raw_data/histograms_tbpoc_fold_0.json
--- a/tests/data/histograms/raw_data/histograms_tbx11k_v1_fold_0.json
+++ b/tests/data/histograms/raw_data/histograms_tbx11k_v1_fold_0.json
--- a/tests/data/histograms/raw_data/histograms_tbx11k_v2_fold_0.json
+++ b/tests/data/histograms/raw_data/histograms_tbx11k_v2_fold_0.json
--- a/src/mednet/libs/classification/tests/data/lfs/.gitattributes
+++ b/src/mednet/libs/classification/tests/data/lfs/.gitattributes
+_test_densenetrs_checkpoint.pth filter=lfs diff=lfs merge=lfs -text
+_test_fpasa_checkpoint.pth filter=lfs diff=lfs merge=lfs -text
+_test_logreg_checkpoint.pth filter=lfs diff=lfs merge=lfs -text
+_test_signstotb_checkpoint.pth filter=lfs diff=lfs merge=lfs -text
+_testdb.zip filter=lfs diff=lfs merge=lfs -text
+pasa.pth filter=lfs diff=lfs merge=lfs -text
--- a/src/mednet/libs/classification/tests/data/lfs/.gitignore
+++ b/src/mednet/libs/classification/tests/data/lfs/.gitignore
+*~
--- a/src/mednet/libs/classification/tests/data/lfs/README.md
+++ b/src/mednet/libs/classification/tests/data/lfs/README.md
+# Assets for Testing biosignal/software/mednet>
+
+This package contains test unit assets used by the test suit of
+biosignal/software/mednet>.
+
+
+## Updating
+
+To update the contents of this package, use [git-lfs](https://git-lfs.com),
+following the workflow described at the [GitLab support
+page](https://docs.gitlab.com/ee/topics/git/lfs/).
+
+Cloning and updating the repository, in particular, works the same as before
+and should not impose any workflow changes.
--- a/src/mednet/libs/classification/tests/data/lfs/models/logreg.ckpt
+++ b/src/mednet/libs/classification/tests/data/lfs/models/logreg.ckpt
--- a/src/mednet/libs/classification/tests/data/lfs/models/signstotb.ckpt
+++ b/src/mednet/libs/classification/tests/data/lfs/models/signstotb.ckpt