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medai
software
mednet
Commits
356aaa90
Commit
356aaa90
authored
1 year ago
by
André Anjos
Browse files
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[engine.trainer] Save more informative constants when using an MPS compute engine
parent
dc86f848
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2 changed files
src/mednet/engine/trainer.py
+10
-3
10 additions, 3 deletions
src/mednet/engine/trainer.py
src/mednet/utils/resources.py
+106
-44
106 additions, 44 deletions
src/mednet/utils/resources.py
with
116 additions
and
47 deletions
src/mednet/engine/trainer.py
+
10
−
3
View file @
356aaa90
...
...
@@ -14,7 +14,12 @@ import lightning.pytorch.loggers
import
torch.nn
from
..utils.checkpointer
import
CHECKPOINT_ALIASES
from
..utils.resources
import
ResourceMonitor
,
cpu_constants
,
cuda_constants
from
..utils.resources
import
(
ResourceMonitor
,
cpu_constants
,
cuda_constants
,
mps_constants
,
)
from
.callbacks
import
LoggingCallback
from
.device
import
DeviceManager
,
SupportedPytorchDevice
...
...
@@ -96,11 +101,13 @@ def static_information_to_csv(
if
results
is
not
None
:
logdata
.
update
(
results
)
case
"
mps
"
:
pass
results
=
mps_constants
()
if
results
is
not
None
:
logdata
.
update
(
results
)
case
_
:
pass
logdata
[
"
model_size
"
]
=
model_size
logdata
[
"
number-of-model-parameters
"
]
=
model_size
logwriter
=
csv
.
DictWriter
(
f
,
fieldnames
=
logdata
.
keys
())
logwriter
.
writeheader
()
logwriter
.
writerow
(
logdata
)
...
...
This diff is collapsed.
Click to expand it.
src/mednet/utils/resources.py
+
106
−
44
View file @
356aaa90
...
...
@@ -77,6 +77,73 @@ def run_nvidia_smi(
return
retval
def
run_powermetrics
(
time_window_ms
:
int
=
500
,
key
:
str
|
None
=
None
)
->
dict
[
str
,
typing
.
Any
]
|
None
:
"""
Returns GPU information from the system.
For a comprehensive list of options and help, execute ``man powermetrics``
on a Mac computer with Apple silicon.
Parameters
----------
time_window_ms
The amount of time, in milliseconds, to collect usage information on
the GPU.
key
If specified returns only a sub-key of the dictionary.
Returns
-------
data
A dictionary containing the GPU information.
"""
cmd
=
[
"
sudo
"
,
"
-n
"
,
"
/usr/bin/powermetrics
"
,
"
--samplers
"
,
"
gpu_power
"
,
f
"
-i
{
time_window_ms
}
"
,
"
-n1
"
,
"
-fplist
"
,
]
try
:
raw_bytes
=
subprocess
.
check_output
(
cmd
)
data
=
plistlib
.
loads
(
raw_bytes
)
return
data
[
key
]
if
key
is
not
None
else
data
except
subprocess
.
CalledProcessError
:
import
inspect
import
warnings
warnings
.
warn
(
inspect
.
cleandoc
(
f
"""
Cannot run `sudo powermetrics` without a password. Probably,
you did not setup sudo to execute the macOS CLI application
`powermetrics` passwordlessly and therefore this warning is
being issued. This does not affect the running of your model
training, only the ability of the resource monitor of gathering
GPU usage information on macOS while using the MPS compute
backend. To configure this properly and get rid of this
warning, execute `sudo visudo` and add the following line where
suitable: `yourusername ALL=(ALL) NOPASSWD:SETENV:
/usr/bin/powermetrics`. Replace `yourusername` by your actual
username on the machine. Test the setup running the command
`
{
'
'
.
join
(
cmd
)
}
` by hand.
"""
)
)
return
None
def
cuda_constants
()
->
dict
[
str
,
str
|
int
|
float
]
|
None
:
"""
Returns GPU (static) information using nvidia-smi.
...
...
@@ -85,7 +152,6 @@ def cuda_constants() -> dict[str, str | int | float] | None:
Returns
-------
data : :py:class:`tuple`, None
If ``nvidia-smi`` is not available, returns ``None``, otherwise, we
return a dictionary containing the following ``nvidia-smi`` query
information, in this order:
...
...
@@ -105,6 +171,37 @@ def cuda_constants() -> dict[str, str | int | float] | None:
return
retval
def
mps_constants
()
->
dict
[
str
,
str
|
int
|
float
]
|
None
:
"""
Returns GPU (static) information using `/usr/bin/powermetrics`.
Returns
-------
data : :py:class:`tuple`, None
If ``nvidia-smi`` is not available, returns ``None``, otherwise, we
return a dictionary containing the following ``nvidia-smi`` query
information, in this order:
* ``gpu_name``, as ``gpu_name`` (:py:class:`str`)
* ``driver_version``, as ``gpu_driver_version`` (:py:class:`str`)
* ``memory.total``, as ``gpu_memory_total`` (transformed to gigabytes,
:py:class:`float`)
"""
raw_bytes
=
subprocess
.
check_output
(
[
"
/usr/sbin/system_profiler
"
,
"
-xml
"
,
"
SPDisplaysDataType
"
]
)
data
=
plistlib
.
loads
(
raw_bytes
)
name
=
data
[
0
][
"
_items
"
][
0
][
"
_name
"
]
no_gpu_cores
=
int
(
data
[
0
][
"
_items
"
][
0
][
"
sppci_cores
"
])
return
{
"
apple-processor-model
"
:
name
,
"
number-cpu-cores
"
:
multiprocessing
.
cpu_count
(),
"
number-gpu-cores
"
:
no_gpu_cores
,
}
def
cuda_log
()
->
dict
[
str
,
float
]
|
None
:
"""
Returns GPU information about current non-static status using nvidia-
smi.
...
...
@@ -114,7 +211,6 @@ def cuda_log() -> dict[str, float] | None:
Returns
-------
data
If ``nvidia-smi`` is not available, returns ``None``, otherwise, we
return a dictionary containing the following ``nvidia-smi`` query
information, in this order:
...
...
@@ -153,7 +249,6 @@ def mps_log() -> dict[str, float] | None:
Returns
-------
data
If ``sudo powermetrics`` is not executable (or is not configured for
passwordless execution), returns ``None``, otherwise, we return a
dictionary containing the following query information, in this order:
...
...
@@ -163,47 +258,15 @@ def mps_log() -> dict[str, float] | None:
(:py:class:`float`, in percent)
"""
cmd
=
[
"
sudo
"
,
"
-n
"
,
"
/usr/bin/powermetrics
"
,
"
--samplers
"
,
"
gpu_power
"
,
"
-i500
"
,
"
-n1
"
,
"
-fplist
"
,
]
result
=
run_powermetrics
(
500
,
key
=
"
gpu
"
)
try
:
raw_bytes
=
subprocess
.
check_output
(
cmd
)
data
=
plistlib
.
loads
(
raw_bytes
)
return
{
"
frequency-MHz/gpu
"
:
float
(
data
[
"
gpu
"
][
"
freq_hz
"
]),
"
percent-usage/gpu
"
:
100
*
(
1
-
data
[
"
gpu
"
][
"
idle_ratio
"
]),
}
except
subprocess
.
CalledProcessError
:
import
inspect
import
warnings
warnings
.
warn
(
inspect
.
cleandoc
(
f
"""
Cannot run `sudo powermetrics` without a password. Probably,
you did not setup sudo to execute the macOS CLI application
`powermetrics` passwordlessly and therefore this warning is
being issued. This does not affect the running of your model
training, only the ability of the resource monitor of gathering
GPU usage information on macOS while using the MPS compute
backend. To configure this properly and get rid of this
warning, execute `sudo visudo` and add the following line where
suitable: `yourusername ALL=(ALL) NOPASSWD:SETENV:
/usr/bin/powermetrics`. Replace `yourusername` by your actual
username on the machine. Test the setup running the command
`
{
'
'
.
join
(
cmd
)
}
` by hand.
"""
)
)
if
result
is
None
:
return
result
return
None
return
{
"
frequency-MHz/gpu
"
:
float
(
result
[
"
freq_hz
"
]),
"
percent-usage/gpu
"
:
100
*
(
1
-
result
[
"
idle_ratio
"
]),
}
def
cpu_constants
()
->
dict
[
str
,
int
|
float
]:
...
...
@@ -212,8 +275,7 @@ def cpu_constants() -> dict[str, int | float]:
Returns
-------
data
An ordered dictionary (organized as 2-tuples) containing these entries:
A dictionary containing these entries:
0. ``cpu_memory_total`` (:py:class:`float`): total memory available,
in gigabytes
...
...
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Click to expand it.
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