############## options that are required to be specified #######################
config_group=parser.add_argument_group(
'\nParameters defining the experiment. Most of these parameters can be a registered resource, a configuration file, or even a string that defines a newly created object')
'\nParameters defining the experiment. Most of these parameters can be a registered resource, a '
'configuration file, or even a string that defines a newly created object')
help='The directory for resulting score files, default is: %s.'%results)
file_group=parser.add_argument_group(
'\nName (maybe including a path relative to the --temp-directory, if not specified otherwise) of files that will be generated. Note that not all files will be used by all algorithms')
'\nName (maybe including a path relative to the --temp-directory, if not specified otherwise) of files '
'that will be generated. Note that not all files will be used by all algorithms')
help='An optional file, where database directories are stored (to avoid changing the database configurations)')
help='An optional file, where database directories are stored (to avoid changing the '
'database configurations)')
sub_dir_group=parser.add_argument_group(
'\nSubdirectories of certain parts of the tool chain. You can specify directories in case you want to reuse parts of the experiments (e.g. extracted features) in other experiments. Please note that these directories are relative to the --temp-directory, but you can also specify absolute paths')
'\nSubdirectories of certain parts of the tool chain. You can specify directories in case you want to '
'reuse parts of the experiments (e.g. extracted features) in other experiments. Please note that these '
'directories are relative to the --temp-directory, but you can also specify absolute paths')
help='Starts the local scheduler after submitting the jobs to the local queue (by default, local jobs must be started by hand, e.g., using ./bin/jman --local -vv run-scheduler -x)')
help='Starts the local scheduler after submitting the jobs to the local queue '
'(by default, local jobs must be started by hand, e.g., using ./bin/jman '