Updates pins to the latest versions of installable packages

bob/devtools/data/conda_build_config.yaml

@@ -361,21 +361,21 @@ click:
 click_plugins:
   - "1.1.1"
 cmake:
-  - "3.24.2"
+  - "3.25.1"
 coverage:
-  - "6.4.4"
+  - "7.0.4"
 dask:
-  - "2022.9.1"
+  - "2022.12.1"
 dask_jobqueue:
-  - "0.8.0"
+  - "0.8.1"
 dask_ml:
   - "2022.5.27"
 ddt:
-  - "1.4.1"
+  - "1.6.0"
 distributed:
-  - "2022.9.1"
+  - "2022.12.1"
 docker_py:
-  - "5.0.3"
+  - "6.0.0"
 docopt:
   - "0.6.2"
 flaky:
@@ -385,11 +385,11 @@ font_ttf_dejavu_sans_mono:
 freetype:
   - "2.12.1"
 graphviz:
-  - "6.0.1"
+  - "7.0.6"
 h5py:
   - "3.7.0"
 imageio:
-  - "2.22.0"
+  - "2.24.0"
 imageio_ffmpeg:
   - "0.4.7"
 jinja2:
@@ -397,50 +397,50 @@ jinja2:
 make:
   - "4.3"
 matplotlib:
-  - "3.6.0"
+  - "3.6.2"
 mne_base:
-  - "1.1.1"
+  - "1.3.0"
 ncurses:
   - "6.3"
 nose:
   - "1.3.7"
 numba:
-  - "0.55.2"
+  - "0.56.4"
 numpy:
-  - "1.22.4"
+  - "1.23.5"
 opencv:
   - "4.6.0"
 openpyxl:
   - "3.0.10"
 pandas:
-  - "1.5.0"
+  - "1.5.2"
 pillow:
-  - "9.2.0"
+  - "9.4.0"
 pip:
-  - "22.2.2"
+  - "22.3.1"
 pkg_config:
   - "0.29.2"
 psutil:
-  - "5.9.2"
+  - "5.9.4"
 pybind11:
-  - "2.10.0"
+  - "2.10.3"
 pysoundfile:
-  - "0.10.3.post1"
+  - "0.11.0"
 pytest:
-  - "7.1.3"
+  - "7.2.0"
 pytest_cov:
-  - "3.0.0"
+  - "4.0.0"
 python_graphviz:
   - "0.20.1"
 pytorch:
-  - "1.12.1 cuda*"  # [linux]
-  - "1.12.1"  # [osx]
+  - "1.13.0 cuda*"  # [linux]
+  - "1.13.0"  # [osx]
 pytorch_lightning:
-  - "1.5.8"
+  - "1.8.1"
 pyyaml:
   - "6.0"
 pyzmq:
-  - "24.0.0"
+  - "24.0.1"
 requests:
   - "2.28.1"
 schema:
@@ -448,50 +448,50 @@ schema:
 scikit_image:
   - "0.19.3"
 scikit_learn:
-  - "1.1.2"
+  - "1.2.0"
 scipy:
-  - "1.9.1"
+  - "1.10.0"
 setuptools:
-  - "65.3.0"
+  - "65.6.3"
 shap:
   - "0.41.0"
 simplejson:
-  - "3.17.6"
+  - "3.18.1"
 six:
   - "1.16.0"
 sphinx:
-  - "5.1.1"
+  - "6.1.2"
 sphinx_autodoc_typehints:
-  - "1.19.2"
+  - "1.20.1"
 sphinx_click:
-  - "4.3.0"
+  - "4.4.0"
 sphinx_rtd_theme:
-  - "1.0.0"
+  - "0.5.2"
 sphinxcontrib_programoutput:
   - "0.17"
 sqlalchemy:
-  - "1.4.41"
+  - "1.4.46"
 tabulate:
-  - "0.8.10"
+  - "0.9.0"
 tensorboard:
-  - "2.9.0"
+  - "2.11.0"
 tensorflow:
-  - "2.9.1 cuda*"  # [linux]
-  - "2.9.1"  # [osx]
+  - "2.11.0 cuda*"  # [linux]
+  - "2.11.0"  # [osx]
 termcolor:
-  - "2.0.1"
+  - "2.2.0"
 tomli:
   - "2.0.1"
 tomli_w:
   - "1.0.0"
 torchvision:
-  - "0.13.0"
+  - "0.14.0"
 tqdm:
   - "4.64.1"
 xarray:
-  - "2022.6.0"
+  - "2022.12.0"
 xgboost:
-  - "1.6.2"
+  - "1.7.1"
 xlrd:
   - "2.0.1"
 

bob/devtools/data/pip-constraints.txt

-abseil-cpp==20211102.0
-absl-py==1.2.0
+absl-py==1.3.0
 aiohttp==3.8.3
-aiosignal==1.2.0
+aiosignal==1.3.1
 alabaster==0.7.12
-aom==3.4.0
+aom==3.5.0
 appdirs==1.4.4
-asn1crypto==1.5.1
 astunparse==1.6.3
 async-timeout==4.0.2
-atk-1.0==2.36.0
-attrs==22.1.0
-babel==2.10.3
-blinker==1.4
-blosc==1.21.1
+atk-1.0==2.38.0
+attrs==22.2.0
+babel==2.11.0
+bcrypt==3.2.2
+blinker==1.5
+blosc==1.21.3
 bokeh==2.4.3
 brotli==1.0.9
 brotli-bin==1.0.9
@@ -20,136 +19,138 @@ brotlipy==0.7.0
 brunsli==0.1
 bzip2==1.0.8
 c-ares==1.18.1
-c-blosc2==2.4.1
-ca-certificates==2022.9.14
+c-blosc2==2.6.1
+ca-certificates==2022.12.7
 cached-property==1.5.2
 cached_property==1.5.2
 cachetools==5.2.0
 cairo==1.16.0
-certifi==2022.9.14
+certifi==2022.12.7
 cffi==1.15.1
-cfitsio==4.1.0
+cfitsio==4.2.0
 charls==2.3.4
 charset-normalizer==2.1.1
 click==8.1.3
 click-plugins==1.1.1
 cloudpickle==2.2.0
-cmake==3.24.2
-colorama==0.4.5
+cmake==3.25.1
+colorama==0.4.6
 contextlib2==0.5.5
-contourpy==1.0.5
-coverage==6.4.4
-cryptography==37.0.4
+contourpy==1.0.6
+coverage==7.0.4
+cryptography==39.0.0
 cycler==0.11.0
 cytoolz==0.12.0
-dask==2022.9.1
-dask-core==2022.9.1
+dask==2022.12.1
+dask-core==2022.12.1
 dask-glm==0.2.0
-dask-jobqueue==0.8.0
+dask-jobqueue==0.8.1
 dask-ml==2022.5.27
 dav1d==1.0.0
-ddt==1.4.1
+ddt==1.6.0
 decorator==5.1.1
-distributed==2022.9.1
-docker-py==5.0.3
-docker-pycreds==0.4.0
+distributed==2022.12.1
+docker-py==6.0.0
 docopt==0.6.2
-docutils==0.17.1
-expat==2.4.9
-ffmpeg==4.4.2
+docutils==0.19
+et_xmlfile==1.0.1
+exceptiongroup==1.1.0
+expat==2.5.0
+ffmpeg==5.1.2
 flaky==3.7.0
+flatbuffers==22.12.06
 font-ttf-dejavu-sans-mono==2.37
 font-ttf-inconsolata==3.000
 font-ttf-source-code-pro==2.038
 font-ttf-ubuntu==0.83
-fontconfig==2.14.0
+fontconfig==2.14.1
 fonts-conda-ecosystem==1
 fonts-conda-forge==1
-fonttools==4.37.3
+fonttools==4.38.0
 freetype==2.12.1
 fribidi==1.0.10
-frozenlist==1.3.1
-fsspec==2022.8.2
-future==0.18.2
+frozenlist==1.3.3
+fsspec==2022.11.0
 gast==0.4.0
-gdk-pixbuf==2.42.8
-gettext==0.19.8.1
+gdk-pixbuf==2.42.10
+gettext==0.21.1
 giflib==5.2.1
 gmp==6.2.1
-gnutls==3.7.7
-google-auth==2.11.1
+gnutls==3.7.8
+google-auth==2.15.0
 google-auth-oauthlib==0.4.6
 google-pasta==0.2.0
 graphite2==1.3.13
-graphviz==6.0.1
-greenlet==1.1.3
-grpc-cpp==1.46.4
-grpcio==1.46.4
+graphviz==7.0.6
+greenlet==2.0.1
+grpcio==1.51.1
 gtk2==2.24.33
 gts==0.7.6
 h5py==3.7.0
-harfbuzz==5.2.0
+harfbuzz==6.0.0
 hdf5==1.12.2
 heapdict==1.0.1
 icu==70.1
 idna==3.4
-imagecodecs==2022.8.8
-imageio==2.22.0
+imagecodecs==2022.12.24
+imageio==2.24.0
 imageio-ffmpeg==0.4.7
 imagesize==1.4.1
-importlib-metadata==4.11.4
-iniconfig==1.1.1
+importlib-metadata==6.0.0
+iniconfig==2.0.0
 jasper==2.0.33
 jinja2==3.1.2
 joblib==1.2.0
 jpeg==9e
 jxrlib==1.1
-keras==2.9.0
+keras==2.11.0
 keras-preprocessing==1.1.2
 kiwisolver==1.4.4
-krb5==1.19.3
+krb5==1.20.1
 lame==3.100
-lcms2==2.12
+lcms2==2.14
 lerc==4.0.0
-libabseil==20211102.0
+libabseil==20220623.0
 libaec==1.0.6
-libavif==0.10.1
+libavif==0.11.1
 libblas==3.9.0
 libbrotlicommon==1.0.9
 libbrotlidec==1.0.9
 libbrotlienc==1.0.9
 libcblas==3.9.0
-libcurl==7.83.1
+libcurl==7.87.0
 libcxx==14.0.6
 libdeflate==1.14
 libedit==3.1.20191231
 libev==4.33
 libffi==3.4.2
-libflac==1.3.4
+libflac==1.4.2
 libgd==2.3.3
 libgfortran==5.0.0
 libgfortran5==11.3.0
-libglib==2.72.1
-libiconv==1.16
-libidn2==2.3.3
+libglib==2.74.1
+libgrpc==1.51.1
+libiconv==1.17
+libidn2==2.3.4
+libjpeg-turbo==2.1.4
 liblapack==3.9.0
 liblapacke==3.9.0
 libllvm11==11.1.0
-libnghttp2==1.47.0
+libnghttp2==1.51.0
 libogg==1.3.4
 libopenblas==0.3.21
 libopencv==4.6.0
 libopus==1.3.1
-libpng==1.6.38
-libprotobuf==3.20.1
+libpng==1.6.39
+libprotobuf==3.21.12
 librsvg==2.54.4
-libsndfile==1.0.31
+libsndfile==1.2.0
 libsodium==1.0.18
-libsqlite==3.39.3
+libsqlite==3.40.0
 libssh2==1.10.0
 libtasn1==4.19.0
-libtiff==4.4.0
-libtool==2.4.6
+libtiff==4.5.0
+libtool==2.4.7
 libunistring==0.9.10
 libuv==1.44.2
 libvorbis==1.3.7
@@ -157,79 +158,84 @@ libvpx==1.11.0
 libwebp==1.2.4
 libwebp-base==1.2.4
 libxcb==1.13
-libxml2==2.9.14
-libzlib==1.2.12
+libxgboost==1.7.1
+libxml2==2.10.3
+libzlib==1.2.13
 libzopfli==1.0.3
-llvm-openmp==14.0.4
-llvmlite==0.38.1
+lightning-utilities==0.5.0
+llvm-openmp==15.0.6
+llvmlite==0.39.1
 locket==1.0.0
-lz4==4.0.0
+lz4==4.2.0
 lz4-c==1.9.3
 make==4.3
 markdown==3.4.1
 markupsafe==2.1.1
-matplotlib==3.6.0
-matplotlib-base==3.6.0
-mne-base==1.1.1
+matplotlib==3.6.2
+matplotlib-base==3.6.2
+mne-base==1.3.0
+mpg123==1.31.1
 msgpack-python==1.0.4
-multidict==6.0.2
+multidict==6.0.4
 multipledispatch==0.6.0
 munkres==1.1.4
 ncurses==6.3
 nettle==3.8.1
-networkx==2.8.6
+networkx==3.0
 ninja==1.11.0
 nose==1.3.7
-numba==0.55.2
-numpy==1.22.4
-oauthlib==3.2.1
+numba==0.56.4
+numpy==1.23.5
+oauthlib==3.2.2
 opencv==4.6.0
-openh264==2.3.0
+openh264==2.3.1
 openjpeg==2.5.0
 openpyxl==3.0.10
-openssl==1.1.1q
+openssl==3.0.7
 opt_einsum==3.3.0
 p11-kit==0.24.1
-packaging==21.3
-pandas==1.5.0
-pango==1.50.10
+packaging==22.0
+pandas==1.5.2
+pango==1.50.12
+paramiko==2.12.0
 partd==1.3.0
-pcre==8.45
-pillow==9.2.0
-pip==22.2.2
+pcre2==10.40
+pillow==9.4.0
+pip==22.3.1
 pixman==0.40.0
 pkg-config==0.29.2
 pluggy==1.0.0
 pooch==1.6.0
-protobuf==3.20.1
-psutil==5.9.2
+protobuf==4.21.12
+psutil==5.9.4
 pthread-stubs==0.4
-py==1.11.0
 py-opencv==4.6.0
+py-xgboost==1.7.1
 pyasn1==0.4.8
 pyasn1-modules==0.2.7
-pybind11==2.10.0
-pybind11-global==2.10.0
+pybind11==2.10.3
+pybind11-global==2.10.3
 pycparser==2.21
-pydeprecate==0.3.1
-pygments==2.13.0
-pyjwt==2.5.0
-pyopenssl==22.0.0
+pygments==2.14.0
+pyjwt==2.6.0
+pynacl==1.5.0
+pyopenssl==23.0.0
 pyparsing==3.0.9
 pysocks==1.7.1
-pysoundfile==0.10.3.post1
-pytest==7.1.3
-pytest-cov==3.0.0
-python==3.10.6
+pysoundfile==0.11.0
+pytest==7.2.0
+pytest-cov==4.0.0
+python==3.10.8
 python-dateutil==2.8.2
-python-flatbuffers==1.12
+python-flatbuffers==23.1.4
 python-graphviz==0.20.1
 python_abi==3.10
-pytorch==1.12.1
-pytorch-lightning==1.5.8
-pytz==2022.2.1
+pytorch==1.13.0
+pytorch-lightning==1.8.1
+pytz==2022.7
 pyu2f==0.1.5
-pywavelets==1.3.0
+pywavelets==1.4.1
+pywin32-on-windows==0.1.0
 pyyaml==6.0
 pyzmq==24.0.1
 re2==2022.06.01
@@ -240,20 +246,21 @@ rhash==1.4.3
 rsa==4.9
 schema==0.7.5
 scikit-image==0.19.3
-scikit-learn==1.1.2
-scipy==1.9.1
-setuptools==65.3.0
+scikit-learn==1.2.0
+scipy==1.10.0
+setuptools==65.6.3
 shap==0.41.0
-simplejson==3.17.6
+simplejson==3.18.1
 six==1.16.0
 sleef==3.5.1
+slicer==0.0.7
 snappy==1.1.9
 snowballstemmer==2.2.0
 sortedcontainers==2.4.0
-sphinx==5.1.1
-sphinx-autodoc-typehints==1.19.2
-sphinx-click==4.3.0
-sphinx_rtd_theme==1.0.0
+sphinx==6.1.2
+sphinx-autodoc-typehints==1.20.1
+sphinx-click==4.4.0
+sphinx_rtd_theme==0.5.2
 sphinxcontrib-applehelp==1.0.2
 sphinxcontrib-devhelp==1.0.2
 sphinxcontrib-htmlhelp==2.0.0
@@ -261,51 +268,51 @@ sphinxcontrib-jsmath==1.0.1
 sphinxcontrib-programoutput==0.17
 sphinxcontrib-qthelp==1.0.3
 sphinxcontrib-serializinghtml==1.1.5
-sqlalchemy==1.4.41
-sqlite==3.39.3
-svt-av1==1.2.1
-tabulate==0.8.10
+sqlalchemy==1.4.46
+svt-av1==1.4.1
+tabulate==0.9.0
 tblib==1.7.0
-tensorboard==2.9.0
-tensorboard-data-server==0.6.0
+tensorboard==2.11.0
+tensorboard-data-server==0.6.1
 tensorboard-plugin-wit==1.8.1
-tensorflow==2.9.1
-tensorflow-base==2.9.1
-tensorflow-estimator==2.9.1
-termcolor==2.0.1
+tensorflow==2.11.0
+tensorflow-base==2.11.0
+tensorflow-estimator==2.11.0
+termcolor==2.2.0
 threadpoolctl==3.1.0
-tifffile==2022.8.12
+tifffile==2022.10.10
 tk==8.6.12
 toml==0.10.2
 tomli==2.0.1
 tomli-w==1.0.0
 toolz==0.12.0
-torchmetrics==0.9.3
-torchvision==0.13.0
-tornado==6.1
+torchmetrics==0.11.0
+torchvision==0.14.0
+tornado==6.2
 tqdm==4.64.1
-typing-extensions==4.3.0
-typing_extensions==4.3.0
-tzdata==2022c
-unicodedata2==14.0.0
-urllib3==1.26.11
-websocket-client==1.4.1
+typing-extensions==4.4.0
+typing_extensions==4.4.0
+tzdata==2022g
+unicodedata2==15.0.0
+urllib3==1.26.13
+websocket-client==1.4.2
 werkzeug==2.2.2
-wheel==0.37.1
+wheel==0.38.4
 wrapt==1.14.1
 x264==1!164.3095
 x265==3.5
-xarray==2022.6.0
-xgboost==1.6.2
+xarray==2022.12.0
+xgboost==1.7.1
+xlrd==2.0.1
 xorg-libxau==1.0.9
 xorg-libxdmcp==1.1.3
 xz==5.2.6
 yaml==0.2.5
-yarl==1.7.2
+yarl==1.8.2
 zeromq==4.3.4
 zfp==1.0.0
 zict==2.2.0
-zipp==3.8.1
-zlib==1.2.12
+zipp==3.11.0
+zlib==1.2.13
 zlib-ng==2.0.6
 zstd==1.5.2