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bob
bob.bio.vein
Commits
70507d21
Commit
70507d21
authored
Oct 09, 2020
by
Victor BROS
Browse files
[py] Porting to the new bob.bio.base
parent
c78cdef7
Pipeline
#44020
failed with stage
in 7 minutes and 27 seconds
Changes
4
Pipelines
1
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bob/bio/vein/algorithm/MiuraMatch.py
View file @
70507d21
...
...
@@ -58,8 +58,8 @@ class MiuraMatch (Algorithm):
ch
=
ch
,
cw
=
cw
,
multiple_model_scoring
=
None
,
multiple_probe_scoring
=
None
#
multiple_model_scoring = None,
#
multiple_probe_scoring = None
)
self
.
ch
=
ch
...
...
bob/bio/vein/configurations/verafinger.py
View file @
70507d21
...
...
@@ -12,16 +12,37 @@ You can download the raw data of the `VERA Fingervein`_ database by following
the link.
"""
from
bob.extension
import
rc
from
bob.bio.vein.database.verafinger
import
Database
from
bob.bio.base.pipelines.vanilla_biometrics
import
DatabaseConnector
from
..database.verafinger
import
Database
_verafinger_directory
=
rc
[
"bob.db.verafinger.directory"
]
"""Value of ``~/.bobrc`` for this database"""
_verafinger_directory
=
"[YOUR_VERAFINGER_DIRECTORY]"
"""Value of ``~/.bob_bio_databases.txt`` for this database"""
database
=
Database
(
protocol
=
'Nom'
"""The default protocol to use for tests
You may modify this at runtime by specifying the option ``--protocol`` on the
command-line of ``verify.py`` or using the keyword ``protocol`` on a
configuration file that is loaded **after** this configuration resource.
We accept any biometric recognition protocol implemented by bob.db.verafinger.
Variants of the biometric recognition protocol ending in ``-va`` can be used to
test for vulnerability analysis. For example, use the protocol ``Nom-va`` to
test the vulnerability of a biometric recognition pipeline using the ``Nom``
protocol for enrollment and probe samples from presentation attacks.
"""
database
=
DatabaseConnector
(
Database
(
original_directory
=
_verafinger_directory
,
original_extension
=
'.png'
,
protocol
=
protocol
),
annotation_type
=
None
,
fixed_positions
=
None
)
"""The :py:class:`bob.bio.base.database.BioDatabase` derivative with Verafinger
database settings
...
...
@@ -37,16 +58,4 @@ value to the place where you actually installed the Verafinger Database, as
explained in the section :ref:`bob.bio.vein.baselines`.
"""
protocol
=
'Nom'
"""The default protocol to use for tests
You may modify this at runtime by specifying the option ``--protocol`` on the
command-line of ``verify.py`` or using the keyword ``protocol`` on a
configuration file that is loaded **after** this configuration resource.
We accept any biometric recognition protocol implemented by bob.db.verafinger.
Variants of the biometric recognition protocol ending in ``-va`` can be used to
test for vulnerability analysis. For example, use the protocol ``Nom-va`` to
test the vulnerability of a biometric recognition pipeline using the ``Nom``
protocol for enrollment and probe samples from presentation attacks.
"""
bob/bio/vein/configurations/wide_line_detector.py
View file @
70507d21
...
...
@@ -2,7 +2,7 @@
# vim: set fileencoding=utf-8 :
# Tue 27 Sep 2016 16:48:16 CEST
'''
Huang's Wide-Line Detector and Miura Matching baseline
"""
Huang's Wide-Line Detector and Miura Matching baseline
References:
...
...
@@ -10,31 +10,41 @@ References:
2. [TV13]_
3. [TVM14]_
'''
sub_directory
=
'wld'
"""Sub-directory where results will be placed.
You may change this setting using the ``--sub-directory`` command-line option
or the attribute ``sub_directory`` in a configuration file loaded **after**
this resource.
"""
from
..preprocessor
import
NoCrop
,
TomesLeeMask
,
HuangNormalization
,
\
NoFilter
,
Preprocessor
from
bob.bio.base.transformers
import
PreprocessorTransformer
from
bob.bio.base.transformers
import
ExtractorTransformer
from
bob.bio.base.pipelines.vanilla_biometrics
import
(
VanillaBiometricsPipeline
,
BioAlgorithmLegacy
,
)
from
sklearn.pipeline
import
make_pipeline
from
bob.pipelines
import
wrap
preprocessor
=
Preprocessor
(
crop
=
NoCrop
(),
mask
=
TomesLeeMask
(),
normalize
=
HuangNormalization
(),
filter
=
NoFilter
(),
from
bob.bio.vein.preprocessor
import
(
NoCrop
,
TomesLeeMask
,
HuangNormalization
,
NoFilter
,
Preprocessor
,
)
preprocessor
=
PreprocessorTransformer
(
Preprocessor
(
crop
=
NoCrop
(),
mask
=
TomesLeeMask
(),
normalize
=
HuangNormalization
(),
filter
=
NoFilter
(),
)
)
"""Preprocessing using gray-level based finger cropping and no post-processing
"""
from
.
.extractor
import
WideLineDetector
from
bob.bio.vein
.extractor
import
WideLineDetector
extractor
=
WideLineDetector
()
extractor
=
ExtractorTransformer
(
WideLineDetector
()
)
"""Features are the output of the maximum curvature algorithm, as described on
[HDLTL10]_.
...
...
@@ -43,9 +53,15 @@ Defaults taken from [TV13]_.
# Notice the values of ch and cw are different than those from the
# repeated-line tracking **and** maximum curvature baselines.
from
..algorithm
import
MiuraMatch
algorithm
=
MiuraMatch
(
ch
=
18
,
cw
=
28
)
from
bob.bio.vein.algorithm
import
MiuraMatch
biometric_algorithm
=
BioAlgorithmLegacy
(
MiuraMatch
(
ch
=
18
,
cw
=
28
),
base_dir
=
"/idiap/temp/vbros/pipeline_test/verafinger"
)
"""Miura-matching algorithm with specific settings for search displacement
Defaults taken from [TV13]_.
"""
transformer
=
make_pipeline
(
wrap
([
"sample"
],
preprocessor
),
wrap
([
"sample"
],
extractor
))
pipeline
=
VanillaBiometricsPipeline
(
transformer
,
biometric_algorithm
)
setup.py
View file @
70507d21
...
...
@@ -49,6 +49,14 @@ setup(
'grid = bob.bio.vein.configurations.gridio4g48'
,
],
'bob.bio.database'
:
[
'verafinger = bob.bio.vein.configurations.verafinger:database'
,
],
'bob.bio.pipeline'
:
[
'wld = bob.bio.vein.configurations.wide_line_detector:pipeline'
],
'console_scripts'
:
[
'bob_bio_vein_compare_rois.py = bob.bio.vein.script.compare_rois:main'
,
'bob_bio_vein_view_sample.py = bob.bio.vein.script.view_sample:main'
,
...
...
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