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Created with Raphaël 2.2.06Dec5432130Nov26252423222018171211109653231Oct30282620161413129876230Sep16151428Aug1312427Jul7224Jun23191817161512329May27262215141211108765432130Apr26242031Mar3029272625242321201918171610227Feb262422171073Jan13Nov29Oct1612Sep7Aug21Jun7614Feb9Oct26Sep31Aug2719Jul13121097328Jun2726222120765430May232218171615129743130Apr26252423201918161312111096526Mar20161211109127Feb2522212015119524Jan16103222Dec5428Nov27171413109876326Oct25242320191611109528Sep26228730Aug29282524Make compare samples work with DelayedSample instead of SampleMake legacy scoring write on the /tmp in some casesMerge branch 'legacy-update' into 'master'[legacy] Updated subject to reference_id in the lecacy DB interfaceMerge branch 'new-db-again' into 'master'Implemented ZTNorm interfaceUpdated examples for the [nosetests][test.utils] Fixed issue with module not foundUpdated the partition_size heuristicsUpdated documentation [sphinx]Merge branch 'test-utils-atnt-module-missing' into 'master'Make the databases work transparently with with either tarballs or csv files[test.utils] Handle ModuleNotFoundError when bob.db.atnt is not available[py] Added json as default annotation type[py] Added sparce scoring[py] Removed BICAdapting CSVDevEval to work with our current FileList StructureMerge branch 'master' into check-statelessMerge branch 'delayed-sample-cache' into 'master'Used the DelayedSampleSetCached in the BioAlgorithmCheckpointWrapperMerge branch 'db-all-samples' into 'master'Keep low level group name away from the high levelEdit the annotate commands with correct defaults.Handle 'train' group in database.all_samples()Add groups() to the dummy legacy databaseMerge branch 'memory-demanding' into 'master'Added the memory_demanding attribute as part of the legacy APiMerge branch 'dask-client-as-string' into 'master'[scripts][pipelines] allow dask-clients as stringsMerge branch 'db-all-samples' into 'master'Merge branch 'master' into 'db-all-samples'Apply suggestion to bob/bio/base/database/csv_dataset.pyMerge branch 'fix-for-delayed-samples' into 'master'[doc] Added info on database.all_samplesAdded tests for cross_validation all_samplesAdd a test for retrieving all samplesAdded all_samples to csv dataset classes[db] Add a method to get all samples of a dataset.[legacy] database.all_files handles 'None' groupsRemove fiddling with bob.pipelines.Samples's internals