Add bob bio annotate-samples command

This command works very similar to bob bio annotate except that works without a db interface. Instead, it requires a list of samples and two functions to do the job.

I would appreciate some early feedback on this.

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• 769f5bc3...b203ba40 - 8 commits from branch master
• 6a8f94c6 - Add bob bio annotate-samples command

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mentioned in commit 8c353346

mentioned in issue bob#259 (closed)