Amir MOHAMMADI
--- a/bob/bio/base/script/annotate.py
+++ b/bob/bio/base/script/annotate.py
 import click
 from os.path import dirname, isfile, expanduser
 from bob.extension.scripts.click_helper import (
-    verbosity_option, ConfigCommand, ResourceOption)
+    verbosity_option, ConfigCommand, ResourceOption, log_parameters)
--- a/bob/bio/base/script/annotate.py
+++ b/bob/bio/base/script/annotate.py
 from bob.extension.scripts.click_helper import (
-    verbosity_option, ConfigCommand, ResourceOption)
+    verbosity_option, ConfigCommand, ResourceOption, log_parameters)
 from bob.io.base import create_directories_safe
 from bob.bio.base.tools.grid import indices

 logger = logging.getLogger(__name__)


-@click.command(entry_point_group='bob.bio.config', cls=ConfigCommand)
+ANNOTATE_EPILOG = '''\b
+Examples:
+
+  $ bob bio annotate -vvv -d <database> -a <annotator> -o /tmp/annotations
+  $ jman submit --array 64 -- bob bio annotate ... --array 64
+'''
--- a/bob/bio/base/script/annotate.py
+++ b/bob/bio/base/script/annotate.py
+              help='A callable that takes the database and a sample (biofile) '
+              'of the database and returns the annotations in a dictionary.')
+@click.option('--output-dir', '-o', required=True, cls=ResourceOption,
+              help='The directory to save the annotations.')
+@click.option('--force', '-f', is_flag=True, cls=ResourceOption,
+              help='Whether to overwrite existing annotations.')
+@click.option('--array', type=click.INT, default=1, cls=ResourceOption,
+              help='Use this option alongside gridtk to submit this script as '
+              'an array job.')
 @click.option('--database-directories-file', cls=ResourceOption,
-              default=expanduser('~/.bob_bio_databases.txt'))
+              default=expanduser('~/.bob_bio_databases.txt'),
+              help='(Deprecated) To support loading of old databases.')
 @verbosity_option(cls=ResourceOption)
 def annotate(database, annotator, output_dir, force, array,
             database_directories_file, **kwargs):
--- a/bob/bio/base/script/annotate.py
+++ b/bob/bio/base/script/annotate.py

-@click.command(entry_point_group='bob.bio.config', cls=ConfigCommand)
+ANNOTATE_EPILOG = '''\b
+Examples:
+
+  $ bob bio annotate -vvv -d <database> -a <annotator> -o /tmp/annotations
+  $ jman submit --array 64 -- bob bio annotate ... --array 64
+'''
+
+
+@click.command(entry_point_group='bob.bio.config', cls=ConfigCommand,
+               epilog=ANNOTATE_EPILOG)
 @click.option('--database', '-d', required=True, cls=ResourceOption,
-              entry_point_group='bob.bio.database')
+              entry_point_group='bob.bio.database',
+              help='''The database that you want to annotate.''')