From 9b6d73867318e40ef634e86074adda40c25dcdf7 Mon Sep 17 00:00:00 2001
From: Andre Anjos <andre.dos.anjos@gmail.com>
Date: Fri, 28 Jul 2023 08:31:08 +0200
Subject: [PATCH] [montgomery_shenzhen_indian] Refactor aggregated dataset
---
pyproject.toml | 42 +++++-----
src/ptbench/data/mc_ch_in/__init__.py | 3 -
src/ptbench/data/mc_ch_in/default.py | 81 ------------------
src/ptbench/data/mc_ch_in/fold_0.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_1.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_2.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_3.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_4.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_5.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_6.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_7.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_8.py | 82 -------------------
src/ptbench/data/mc_ch_in/fold_9.py | 82 -------------------
.../montgomery_shenzhen_indian/__init__.py | 0
.../montgomery_shenzhen_indian/datamodule.py | 43 ++++++++++
.../montgomery_shenzhen_indian/default.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_0.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_1.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_2.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_3.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_4.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_5.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_6.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_7.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_8.py | 7 ++
.../data/montgomery_shenzhen_indian/fold_9.py | 7 ++
26 files changed, 141 insertions(+), 925 deletions(-)
delete mode 100644 src/ptbench/data/mc_ch_in/__init__.py
delete mode 100644 src/ptbench/data/mc_ch_in/default.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_0.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_1.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_2.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_3.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_4.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_5.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_6.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_7.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_8.py
delete mode 100644 src/ptbench/data/mc_ch_in/fold_9.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/__init__.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/datamodule.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/default.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_0.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_1.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_2.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_3.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_4.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_5.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_6.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_7.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_8.py
create mode 100644 src/ptbench/data/montgomery_shenzhen_indian/fold_9.py
diff --git a/pyproject.toml b/pyproject.toml
index a4c23c48..0b98f409 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -145,29 +145,29 @@ tbx11k_simplified_v2_f9 = "ptbench.data.tbx11k_simplified_v2.fold_9"
# montgomery-shenzhen aggregated dataset
montgomery-shenzhen = "ptbench.data.montgomery_shenzhen.default"
-montgomery-shenzhen_f0 = "ptbench.data.montgomery_shenzhen.fold_0"
-montgomery-shenzhen_f1 = "ptbench.data.montgomery_shenzhen.fold_1"
-montgomery-shenzhen_f2 = "ptbench.data.montgomery_shenzhen.fold_2"
-montgomery-shenzhen_f3 = "ptbench.data.montgomery_shenzhen.fold_3"
-montgomery-shenzhen_f4 = "ptbench.data.montgomery_shenzhen.fold_4"
-montgomery-shenzhen_f5 = "ptbench.data.montgomery_shenzhen.fold_5"
-montgomery-shenzhen_f6 = "ptbench.data.montgomery_shenzhen.fold_6"
-montgomery-shenzhen_f7 = "ptbench.data.montgomery_shenzhen.fold_7"
-montgomery-shenzhen_f8 = "ptbench.data.montgomery_shenzhen.fold_8"
-montgomery-shenzhen_f9 = "ptbench.data.montgomery_shenzhen.fold_9"
+montgomery-shenzhen-f0 = "ptbench.data.montgomery_shenzhen.fold_0"
+montgomery-shenzhen-f1 = "ptbench.data.montgomery_shenzhen.fold_1"
+montgomery-shenzhen-f2 = "ptbench.data.montgomery_shenzhen.fold_2"
+montgomery-shenzhen-f3 = "ptbench.data.montgomery_shenzhen.fold_3"
+montgomery-shenzhen-f4 = "ptbench.data.montgomery_shenzhen.fold_4"
+montgomery-shenzhen-f5 = "ptbench.data.montgomery_shenzhen.fold_5"
+montgomery-shenzhen-f6 = "ptbench.data.montgomery_shenzhen.fold_6"
+montgomery-shenzhen-f7 = "ptbench.data.montgomery_shenzhen.fold_7"
+montgomery-shenzhen-f8 = "ptbench.data.montgomery_shenzhen.fold_8"
+montgomery-shenzhen-f9 = "ptbench.data.montgomery_shenzhen.fold_9"
# montgomery-shenzhen-indian aggregated dataset
-mc_ch_in = "ptbench.data.mc_ch_in.default"
-mc_ch_in_f0 = "ptbench.data.mc_ch_in.fold_0"
-mc_ch_in_f1 = "ptbench.data.mc_ch_in.fold_1"
-mc_ch_in_f2 = "ptbench.data.mc_ch_in.fold_2"
-mc_ch_in_f3 = "ptbench.data.mc_ch_in.fold_3"
-mc_ch_in_f4 = "ptbench.data.mc_ch_in.fold_4"
-mc_ch_in_f5 = "ptbench.data.mc_ch_in.fold_5"
-mc_ch_in_f6 = "ptbench.data.mc_ch_in.fold_6"
-mc_ch_in_f7 = "ptbench.data.mc_ch_in.fold_7"
-mc_ch_in_f8 = "ptbench.data.mc_ch_in.fold_8"
-mc_ch_in_f9 = "ptbench.data.mc_ch_in.fold_9"
+montgomery-shenzhen-indian = "ptbench.data.montgomery_shenzhen_indian.default"
+montgomery-shenzhen-indian-f0 = "ptbench.data.montgomery_shenzhen_indian.fold_0"
+montgomery-shenzhen-indian-f1 = "ptbench.data.montgomery_shenzhen_indian.fold_1"
+montgomery-shenzhen-indian-f2 = "ptbench.data.montgomery_shenzhen_indian.fold_2"
+montgomery-shenzhen-indian-f3 = "ptbench.data.montgomery_shenzhen_indian.fold_3"
+montgomery-shenzhen-indian-f4 = "ptbench.data.montgomery_shenzhen_indian.fold_4"
+montgomery-shenzhen-indian-f5 = "ptbench.data.montgomery_shenzhen_indian.fold_5"
+montgomery-shenzhen-indian-f6 = "ptbench.data.montgomery_shenzhen_indian.fold_6"
+montgomery-shenzhen-indian-f7 = "ptbench.data.montgomery_shenzhen_indian.fold_7"
+montgomery-shenzhen-indian-f8 = "ptbench.data.montgomery_shenzhen_indian.fold_8"
+montgomery-shenzhen-indian-f9 = "ptbench.data.montgomery_shenzhen_indian.fold_9"
# montgomery-shenzhen-indian-tbx11k aggregated dataset
mc_ch_in_11k = "ptbench.data.mc_ch_in_11k.default"
diff --git a/src/ptbench/data/mc_ch_in/__init__.py b/src/ptbench/data/mc_ch_in/__init__.py
deleted file mode 100644
index 662d5c13..00000000
--- a/src/ptbench/data/mc_ch_in/__init__.py
+++ /dev/null
@@ -1,3 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
diff --git a/src/ptbench/data/mc_ch_in/default.py b/src/ptbench/data/mc_ch_in/default.py
deleted file mode 100644
index 485173aa..00000000
--- a/src/ptbench/data/mc_ch_in/default.py
+++ /dev/null
@@ -1,81 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets."""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.default import datamodule as indian_datamodule
-from ..montgomery.default import datamodule as mc_datamodule
-from ..shenzhen.default import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_0.py b/src/ptbench/data/mc_ch_in/fold_0.py
deleted file mode 100644
index db749a38..00000000
--- a/src/ptbench/data/mc_ch_in/fold_0.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 0)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_0 import datamodule as indian_datamodule
-from ..montgomery.fold_0 import datamodule as mc_datamodule
-from ..shenzhen.fold_0 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_1.py b/src/ptbench/data/mc_ch_in/fold_1.py
deleted file mode 100644
index 033f5bc5..00000000
--- a/src/ptbench/data/mc_ch_in/fold_1.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 1)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_1 import datamodule as indian_datamodule
-from ..montgomery.fold_1 import datamodule as mc_datamodule
-from ..shenzhen.fold_1 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_2.py b/src/ptbench/data/mc_ch_in/fold_2.py
deleted file mode 100644
index bcd7654c..00000000
--- a/src/ptbench/data/mc_ch_in/fold_2.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 2)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_2 import datamodule as indian_datamodule
-from ..montgomery.fold_2 import datamodule as mc_datamodule
-from ..shenzhen.fold_2 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_3.py b/src/ptbench/data/mc_ch_in/fold_3.py
deleted file mode 100644
index e09e6080..00000000
--- a/src/ptbench/data/mc_ch_in/fold_3.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 3)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_3 import datamodule as indian_datamodule
-from ..montgomery.fold_3 import datamodule as mc_datamodule
-from ..shenzhen.fold_3 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_4.py b/src/ptbench/data/mc_ch_in/fold_4.py
deleted file mode 100644
index cd472c6b..00000000
--- a/src/ptbench/data/mc_ch_in/fold_4.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 4)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_4 import datamodule as indian_datamodule
-from ..montgomery.fold_4 import datamodule as mc_datamodule
-from ..shenzhen.fold_4 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_5.py b/src/ptbench/data/mc_ch_in/fold_5.py
deleted file mode 100644
index 9afdb1f9..00000000
--- a/src/ptbench/data/mc_ch_in/fold_5.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 5)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_5 import datamodule as indian_datamodule
-from ..montgomery.fold_5 import datamodule as mc_datamodule
-from ..shenzhen.fold_5 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_6.py b/src/ptbench/data/mc_ch_in/fold_6.py
deleted file mode 100644
index 9246629e..00000000
--- a/src/ptbench/data/mc_ch_in/fold_6.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 6)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_6 import datamodule as indian_datamodule
-from ..montgomery.fold_6 import datamodule as mc_datamodule
-from ..shenzhen.fold_6 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_7.py b/src/ptbench/data/mc_ch_in/fold_7.py
deleted file mode 100644
index 7f628c9b..00000000
--- a/src/ptbench/data/mc_ch_in/fold_7.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 7)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_7 import datamodule as indian_datamodule
-from ..montgomery.fold_7 import datamodule as mc_datamodule
-from ..shenzhen.fold_7 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_8.py b/src/ptbench/data/mc_ch_in/fold_8.py
deleted file mode 100644
index 5bc985cb..00000000
--- a/src/ptbench/data/mc_ch_in/fold_8.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 8)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_8 import datamodule as indian_datamodule
-from ..montgomery.fold_8 import datamodule as mc_datamodule
-from ..shenzhen.fold_8 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/mc_ch_in/fold_9.py b/src/ptbench/data/mc_ch_in/fold_9.py
deleted file mode 100644
index 641fdc67..00000000
--- a/src/ptbench/data/mc_ch_in/fold_9.py
+++ /dev/null
@@ -1,82 +0,0 @@
-# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
-#
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-"""Aggregated dataset composed of Montgomery, Shenzhen and Indian datasets
-(cross validation fold 9)"""
-
-from clapper.logging import setup
-from torch.utils.data.dataset import ConcatDataset
-
-from .. import return_subsets
-from ..base_datamodule import BaseDataModule, get_dataset_from_module
-from ..indian.fold_9 import datamodule as indian_datamodule
-from ..montgomery.fold_9 import datamodule as mc_datamodule
-from ..shenzhen.fold_9 import datamodule as ch_datamodule
-
-logger = setup(__name__.split(".")[0], format="%(levelname)s: %(message)s")
-
-
-class DefaultModule(BaseDataModule):
- def __init__(
- self,
- train_batch_size=1,
- predict_batch_size=1,
- drop_incomplete_batch=False,
- multiproc_kwargs=None,
- ):
- self.train_batch_size = train_batch_size
- self.predict_batch_size = predict_batch_size
- self.drop_incomplete_batch = drop_incomplete_batch
- self.multiproc_kwargs = multiproc_kwargs
-
- super().__init__(
- train_batch_size=train_batch_size,
- predict_batch_size=predict_batch_size,
- drop_incomplete_batch=drop_incomplete_batch,
- multiproc_kwargs=multiproc_kwargs,
- )
-
- def setup(self, stage: str):
- # Instantiate other datamodules and get their datasets
-
- module_args = {
- "train_batch_size": self.train_batch_size,
- "predict_batch_size": self.predict_batch_size,
- "drop_incomplete_batch": self.drop_incomplete_batch,
- "multiproc_kwargs": self.multiproc_kwargs,
- }
-
- mc = get_dataset_from_module(mc_datamodule, stage, **module_args)
- ch = get_dataset_from_module(ch_datamodule, stage, **module_args)
- indian = get_dataset_from_module(
- indian_datamodule, stage, **module_args
- )
-
- # Combine datasets
- self.dataset = {}
- self.dataset["__train__"] = ConcatDataset(
- [mc["__train__"], ch["__train__"], indian["__train__"]]
- )
- self.dataset["train"] = ConcatDataset(
- [mc["train"], ch["train"], indian["train"]]
- )
- self.dataset["__valid__"] = ConcatDataset(
- [mc["__valid__"], ch["__valid__"], indian["__valid__"]]
- )
- self.dataset["validation"] = ConcatDataset(
- [mc["validation"], ch["validation"], indian["validation"]]
- )
- self.dataset["test"] = ConcatDataset(
- [mc["test"], ch["test"], indian["test"]]
- )
-
- (
- self.train_dataset,
- self.validation_dataset,
- self.extra_validation_datasets,
- self.predict_dataset,
- ) = return_subsets(self.dataset)
-
-
-datamodule = DefaultModule
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/__init__.py b/src/ptbench/data/montgomery_shenzhen_indian/__init__.py
new file mode 100644
index 00000000..e69de29b
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/datamodule.py b/src/ptbench/data/montgomery_shenzhen_indian/datamodule.py
new file mode 100644
index 00000000..ea2d2a4f
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/datamodule.py
@@ -0,0 +1,43 @@
+# Copyright © 2022 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from ..datamodule import ConcatDataModule
+from ..indian.datamodule import RawDataLoader as IndianLoader
+from ..indian.datamodule import make_split as make_indian_split
+from ..montgomery.datamodule import RawDataLoader as MontgomeryLoader
+from ..montgomery.datamodule import make_split as make_montgomery_split
+from ..shenzhen.datamodule import RawDataLoader as ShenzhenLoader
+from ..shenzhen.datamodule import make_split as make_shenzhen_split
+
+
+class DataModule(ConcatDataModule):
+ """Aggregated datamodule composed of Montgomery and Shenzhen datasets."""
+
+ def __init__(self, split_filename: str):
+ montgomery_loader = MontgomeryLoader()
+ montgomery_split = make_montgomery_split(split_filename)
+ shenzhen_loader = ShenzhenLoader()
+ shenzhen_split = make_shenzhen_split(split_filename)
+ indian_loader = IndianLoader()
+ indian_split = make_indian_split(split_filename)
+
+ super().__init__(
+ splits={
+ "train": [
+ (montgomery_split["train"], montgomery_loader),
+ (shenzhen_split["train"], shenzhen_loader),
+ (indian_split["train"], indian_loader),
+ ],
+ "validation": [
+ (montgomery_split["validation"], montgomery_loader),
+ (shenzhen_split["validation"], shenzhen_loader),
+ (indian_split["validation"], indian_loader),
+ ],
+ "test": [
+ (montgomery_split["test"], montgomery_loader),
+ (shenzhen_split["test"], shenzhen_loader),
+ (indian_split["test"], indian_loader),
+ ],
+ }
+ )
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/default.py b/src/ptbench/data/montgomery_shenzhen_indian/default.py
new file mode 100644
index 00000000..2b8a8fb2
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/default.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("default.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_0.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_0.py
new file mode 100644
index 00000000..3d114d07
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_0.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_0.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_1.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_1.py
new file mode 100644
index 00000000..cd3a8cb6
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_1.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_1.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_2.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_2.py
new file mode 100644
index 00000000..44eeda80
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_2.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_2.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_3.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_3.py
new file mode 100644
index 00000000..f24fb314
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_3.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_3.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_4.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_4.py
new file mode 100644
index 00000000..58456d38
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_4.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_4.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_5.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_5.py
new file mode 100644
index 00000000..92796746
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_5.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_5.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_6.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_6.py
new file mode 100644
index 00000000..9566b7cf
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_6.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_6.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_7.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_7.py
new file mode 100644
index 00000000..25cbfe1b
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_7.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_7.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_8.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_8.py
new file mode 100644
index 00000000..fb5332ce
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_8.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_8.json")
diff --git a/src/ptbench/data/montgomery_shenzhen_indian/fold_9.py b/src/ptbench/data/montgomery_shenzhen_indian/fold_9.py
new file mode 100644
index 00000000..d1626586
--- /dev/null
+++ b/src/ptbench/data/montgomery_shenzhen_indian/fold_9.py
@@ -0,0 +1,7 @@
+# SPDX-FileCopyrightText: Copyright © 2023 Idiap Research Institute <contact@idiap.ch>
+#
+# SPDX-License-Identifier: GPL-3.0-or-later
+
+from .datamodule import DataModule
+
+datamodule = DataModule("fold_9.json")
--
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