diff --git a/src/mednet/scripts/upload.py b/src/mednet/scripts/upload.py index d8b1a4c2a8e583cd6f559abf1abc3c950c4686a8..8b94459754529398b8bd71682f722c550ab3eb11 100644 --- a/src/mednet/scripts/upload.py +++ b/src/mednet/scripts/upload.py @@ -2,16 +2,8 @@ # # SPDX-License-Identifier: GPL-3.0-or-later -import configparser -import json -import os import pathlib -import shutil -import tempfile - import click -import gitlab -import mlflow from clapper.click import ResourceOption, verbosity_option from clapper.logging import setup @@ -27,6 +19,8 @@ def _get_gitlab_config(): ------- Gitlab entry and credential. """ + import gitlab + import configparser cfg = pathlib.Path("~/.python-gitlab.cfg").expanduser() if cfg.exists(): @@ -56,6 +50,8 @@ def _create_temp_copy(source, target): ------- Path to target file in temp folder. """ + import shutil + import tempfile temp_dir = pathlib.Path(tempfile.gettempdir()) target = temp_dir / target @@ -120,6 +116,9 @@ def upload( **_, # ignored ) -> None: # numpydoc ignore=PR01 """Upload results from an experiment folder.""" + import os + import json + import mlflow logger.info("Getting Gitlab credentials for accessing to MLFlow server...") gitlab, config = _get_gitlab_config()