From 0913ace46103d5600aeb738572473b30a3babce3 Mon Sep 17 00:00:00 2001 From: mdelitroz <maxime.delitroz@idiap.ch> Date: Thu, 27 Jul 2023 09:25:46 +0200 Subject: [PATCH] [data.image_utils.py] replaced load_pil_baw by load_pil_grayscale. Updated the docstring and call in the rest of the package accordingly --- src/ptbench/data/hivtb/__init__.py | 4 ++-- src/ptbench/data/image_utils.py | 6 +++--- src/ptbench/data/indian/__init__.py | 4 ++-- src/ptbench/data/tbpoc/__init__.py | 4 ++-- src/ptbench/data/tbx11k_simplified/__init__.py | 6 +++--- src/ptbench/data/tbx11k_simplified_v2/__init__.py | 6 +++--- 6 files changed, 15 insertions(+), 15 deletions(-) diff --git a/src/ptbench/data/hivtb/__init__.py b/src/ptbench/data/hivtb/__init__.py index 88401da0..e004c1dc 100644 --- a/src/ptbench/data/hivtb/__init__.py +++ b/src/ptbench/data/hivtb/__init__.py @@ -20,7 +20,7 @@ import os from ...utils.rc import load_rc from .. import make_dataset from ..dataset import JSONDataset -from ..loader import load_pil_baw, make_delayed +from ..loader import load_pil_grayscale, make_delayed _protocols = [ importlib.resources.files(__name__).joinpath("fold_0.json.bz2"), @@ -40,7 +40,7 @@ _datadir = load_rc().get("datadir.hivtb", os.path.realpath(os.curdir)) def _raw_data_loader(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), label=sample["label"], ) diff --git a/src/ptbench/data/image_utils.py b/src/ptbench/data/image_utils.py index b1c9d82e..9103126f 100644 --- a/src/ptbench/data/image_utils.py +++ b/src/ptbench/data/image_utils.py @@ -96,8 +96,8 @@ def load_pil(path: str | pathlib.Path) -> PIL.Image.Image: return PIL.Image.open(path) -def load_pil_baw(path: str | pathlib.Path) -> PIL.Image.Image: - """Loads a sample data. +def load_pil_grayscale(path: str | pathlib.Path) -> PIL.Image.Image: + """Loads a sample data in grayscale mode ("L"). Parameters ---------- @@ -116,7 +116,7 @@ def load_pil_baw(path: str | pathlib.Path) -> PIL.Image.Image: def load_pil_rgb(path: str | pathlib.Path) -> PIL.Image.Image: - """Loads a sample data. + """Loads a sample data in RGB mode ("RGB"). Parameters ---------- diff --git a/src/ptbench/data/indian/__init__.py b/src/ptbench/data/indian/__init__.py index 5255c783..889cf513 100644 --- a/src/ptbench/data/indian/__init__.py +++ b/src/ptbench/data/indian/__init__.py @@ -19,7 +19,7 @@ import os from ...utils.rc import load_rc from .. import make_dataset from ..dataset import JSONDataset -from ..loader import load_pil_baw, make_delayed +from ..loader import load_pil_grayscale, make_delayed _protocols = [ importlib.resources.files(__name__).joinpath("default.json.bz2"), @@ -40,7 +40,7 @@ _datadir = load_rc().get("datadir.indian", os.path.realpath(os.curdir)) def _raw_data_loader(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), label=sample["label"], ) diff --git a/src/ptbench/data/tbpoc/__init__.py b/src/ptbench/data/tbpoc/__init__.py index 6108b2fb..4d9f4550 100644 --- a/src/ptbench/data/tbpoc/__init__.py +++ b/src/ptbench/data/tbpoc/__init__.py @@ -20,7 +20,7 @@ import os from ...utils.rc import load_rc from .. import make_dataset from ..dataset import JSONDataset -from ..loader import load_pil_baw, make_delayed +from ..loader import load_pil_grayscale, make_delayed _protocols = [ importlib.resources.files(__name__).joinpath("fold_0.json.bz2"), @@ -40,7 +40,7 @@ _datadir = load_rc().get("datadir.tbpoc", os.path.realpath(os.curdir)) def _raw_data_loader(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), label=sample["label"], ) diff --git a/src/ptbench/data/tbx11k_simplified/__init__.py b/src/ptbench/data/tbx11k_simplified/__init__.py index 7e66abc3..901975f6 100644 --- a/src/ptbench/data/tbx11k_simplified/__init__.py +++ b/src/ptbench/data/tbx11k_simplified/__init__.py @@ -28,7 +28,7 @@ import os from ...utils.rc import load_rc from ..dataset import JSONDataset -from ..loader import load_pil_baw, make_delayed, make_delayed_bbox +from ..loader import load_pil_grayscale, make_delayed, make_delayed_bbox _protocols = [ importlib.resources.files(__name__).joinpath("default.json.bz2"), @@ -51,14 +51,14 @@ _datadir = load_rc().get( def _raw_data_loader(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), # type: ignore + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), # type: ignore label=sample["label"], ) def _raw_data_loader_bbox(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), # type: ignore + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), # type: ignore label=sample["label"], bboxes=sample["bboxes"], ) diff --git a/src/ptbench/data/tbx11k_simplified_v2/__init__.py b/src/ptbench/data/tbx11k_simplified_v2/__init__.py index 57323bee..15e39e26 100644 --- a/src/ptbench/data/tbx11k_simplified_v2/__init__.py +++ b/src/ptbench/data/tbx11k_simplified_v2/__init__.py @@ -28,7 +28,7 @@ import os from ...utils.rc import load_rc from ..dataset import JSONDataset -from ..loader import load_pil_baw, make_delayed, make_delayed_bbox +from ..loader import load_pil_grayscale, make_delayed, make_delayed_bbox _protocols = [ importlib.resources.files(__name__).joinpath("default.json.bz2"), @@ -51,14 +51,14 @@ _datadir = load_rc().get( def _raw_data_loader(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), # type: ignore + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), # type: ignore label=sample["label"], ) def _raw_data_loader_bbox(sample): return dict( - data=load_pil_baw(os.path.join(_datadir, sample["data"])), # type: ignore + data=load_pil_grayscale(os.path.join(_datadir, sample["data"])), # type: ignore label=sample["label"], bboxes=sample["bboxes"], ) -- GitLab