diff --git a/doc/evaluation.rst b/doc/evaluation.rst index 6ffbf673e56b1fbbfa8b7e01db77c2537a51787c..e807c954ce2eb867e7a37669904a3d25c56d2bbf 100644 --- a/doc/evaluation.rst +++ b/doc/evaluation.rst @@ -35,39 +35,39 @@ of all evaluated models: -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| | DRIU | M2UNet | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| DRIVE | `DRIU_DRIVE.pth`_ | `M2UNet_DRIVE.pth <m2unet_drive.pth_>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-DRIVE | | `M2UNet_COVD-DRIVE.pth <https://dl.dropboxusercontent.com/s/x5wb84uao8nlx44/M2UNet_COVD-DRIVE.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-DRIVE SSL | | `M2UNet_COVD-DRIVE_SSL.pth <https://dl.dropboxusercontent.com/s/hp7fg6bct0i3awr/M2UNet_COVD-DRIVE_SSL.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| STARE | DRIU_STARE.pth_ | `M2UNet_STARE.pth <https://dl.dropboxusercontent.com/s/pc9wb8r7tjvg06p/M2UNet_STARE.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-STARE | | `M2UNet_COVD-STARE.pth <https://dl.dropboxusercontent.com/s/vh1trws2nxqt65y/M2UNet_COVD-STARE.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-STARE SSL | | `M2UNet_COVD-STARE_SSL.pth <https://dl.dropboxusercontent.com/s/slcvfgf1saf7t19/M2UNet_COVD-STARE_SSL.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| CHASE_DB1 | DRIU_CHASEDB1.pth_ | `M2UNet_CHASEDB1.pth <https://dl.dropboxusercontent.com/s/jqq0z9boi17nhqf/M2UNet_CHASEDB1.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-CHASE_DB1 | | `M2UNet_COVD-CHASEDB1.pth <https://dl.dropboxusercontent.com/s/pvbp0qky13q5o11/M2UNet_COVD-CHASEDB1.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-CHASE_DB1 SSL | | `M2UNet_COVD-CHASEDB1_SSL.pth <https://dl.dropboxusercontent.com/s/qx7mm5h8ywm98fi/M2UNet_COVD-CHASEDB1_SSL.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| IOSTARVESSEL | DRIU_IOSTAR.pth_ | `M2UNet_IOSTARVESSEL.pth <https://dl.dropboxusercontent.com/s/g9jyvar9x8vvihr/M2UNet_IOSTARVESSEL.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-IOSTAR | | `M2UNet_COVD-IOSTAR.pth <https://dl.dropboxusercontent.com/s/t5b2qomq6ey8i9t/M2UNet_COVD-IOSTAR.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-IOSTAR SSL | | `M2UNet_COVD-IOSTAR_SSL.pth <https://dl.dropboxusercontent.com/s/70ynm2k3bpkj4mq/M2UNet_COVD-IOSTAR_SSL.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| HRF | DRIU_HRF.pth_ | `M2UNet_HRF1168.pth <https://dl.dropboxusercontent.com/s/g34g6nai1rsgbsc/M2UNet_HRF1168.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-HRF | | `M2UNet_COVD-HRF.pth <https://dl.dropboxusercontent.com/s/o3edhljeidl6fvi/M2UNet_COVD-HRF.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ -| COVD-HRF SSL | | `M2UNet_COVD-HRF_SSL.pth <https://dl.dropboxusercontent.com/s/2e0aq8a5vbop2yx/M2UNet_COVD-HRF_SSL.pth>`_ | -+--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------+ ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| | DRIU | M2UNet | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| DRIVE | `DRIU_DRIVE.pth`_ | `M2UNet_DRIVE.pth <m2unet_drive.pth_>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-DRIVE | | `M2UNet_COVD-DRIVE.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-DRIVE.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-DRIVE SSL | | `M2UNet_COVD-DRIVE_SSL.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-DRIVE_SSL.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| STARE | DRIU_STARE.pth_ | `M2UNet_STARE.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_STARE.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-STARE | | `M2UNet_COVD-STARE.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-STARE.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-STARE SSL | | `M2UNet_COVD-STARE_SSL.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-STARE_SSL.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| CHASE_DB1 | DRIU_CHASEDB1.pth_ | `M2UNet_CHASEDB1.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_CHASEDB1.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-CHASE_DB1 | | `M2UNet_COVD-CHASEDB1.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-CHASEDB1.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-CHASE_DB1 SSL | | `M2UNet_COVD-CHASEDB1_SSL.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-CHASEDB1_SSL.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| IOSTARVESSEL | DRIU_IOSTAR.pth_ | `M2UNet_IOSTARVESSEL.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_IOSTARVESSEL.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-IOSTAR | | `M2UNet_COVD-IOSTAR.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-IOSTAR.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-IOSTAR SSL | | `M2UNet_COVD-IOSTAR_SSL.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-IOSTAR_SSL.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| HRF | DRIU_HRF.pth_ | `M2UNet_HRF1168.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_HRF1168.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-HRF | | `M2UNet_COVD-HRF.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-HRF.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ +| COVD-HRF SSL | | `M2UNet_COVD-HRF_SSL.pth <https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-HRF_SSL.pth>`_ | ++--------------------+--------------------+--------------------------------------------------------------------------------------------------------------------------------+ @@ -75,8 +75,8 @@ To run evaluation of pretrained models pass url as ``-w`` argument. E.g.: .. code-block:: bash - bob binseg test DRIU DRIVETEST -o Evaluation_DRIU_DRIVE -w https://dl.dropboxusercontent.com/s/rggn9ebj38c06uf/DRIU_DRIVE.pth - bob binseg test M2UNet DRIVETEST -o Evaluation_M2UNet_DRIVE -w https://dl.dropboxusercontent.com/s/55xply8jm0g2skp/M2UNet_DRIVE.pth + bob binseg test DRIU DRIVETEST -o Evaluation_DRIU_DRIVE -w https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/DRIU_DRIVE.pth + bob binseg test M2UNet DRIVETEST -o Evaluation_M2UNet_DRIVE -w https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_DRIVE.pth diff --git a/doc/links.rst b/doc/links.rst index 2183da004f6158447ea4e5cfcbf643750e859aef..12e8c5d3e7d6f2f144f888b8d2c3a2dde515e406 100644 --- a/doc/links.rst +++ b/doc/links.rst @@ -64,25 +64,25 @@ .. Pretrained models -.. _driu_chasedb1.pth: https://dl.dropboxusercontent.com/s/15gxvhdtq0gw074/DRIU_CHASEDB1.pth -.. _driu_drive.pth: https://dl.dropboxusercontent.com/s/rggn9ebj38c06uf/DRIU_DRIVE.pth -.. _driu_hrf.pth: https://dl.dropboxusercontent.com/s/c02m2zyby1zndqx/DRIU_HRF1168.pth -.. _driu_stare.pth: https://dl.dropboxusercontent.com/s/sw5ivfzgz5djirc/DRIU_STARE.pth -.. _driu_iostar.pth: https://dl.dropboxusercontent.com/s/dx1dp8g4nct5r2z/DRIU_IOSTARVESSEL.pth - -.. _m2unet_chasedb1.pth: https://dl.dropboxusercontent.com/s/jqq0z9boi17nhqf/M2UNet_CHASEDB1.pth -.. _m2unet_drive.pth: https://dl.dropboxusercontent.com/s/55xply8jm0g2skp/M2UNet_DRIVE.pth -.. _m2unet_hrf.pth: https://dl.dropboxusercontent.com/s/g34g6nai1rsgbsc/M2UNet_HRF1168.pth -.. _m2unet_stare.pth: https://dl.dropboxusercontent.com/s/pc9wb8r7tjvg06p/M2UNet_STARE.pth -.. _m2unet_iostar.pth: https://dl.dropboxusercontent.com/s/g9jyvar9x8vvihr/M2UNet_IOSTARVESSEL.pth -.. _m2unet_covd-drive.pth: https://dl.dropboxusercontent.com/s/x5wb84uao8nlx44/M2UNet_COVD-DRIVE.pth -.. _m2unet_covd-drive_ssl.pth: https://dl.dropboxusercontent.com/s/hp7fg6bct0i3awr/M2UNet_COVD-DRIVE_SSL.pth -.. _m2unet_covd-stare.pth: https://dl.dropboxusercontent.com/s/vh1trws2nxqt65y/M2UNet_COVD-STARE.pth -.. _m2unet_covd-stare_ssl.pth: https://dl.dropboxusercontent.com/s/slcvfgf1saf7t19/M2UNet_COVD-STARE_SSL.pth -.. _m2unet_covd-chaesdb1.pth: https://dl.dropboxusercontent.com/s/pvbp0qky13q5o11/M2UNet_COVD-CHASEDB1.pth -.. _m2unet_covd-chaesdb1_ssl.pth: https://dl.dropboxusercontent.com/s/qx7mm5h8ywm98fi/M2UNet_COVD-CHASEDB1_SSL.pth -.. _m2unet_covd-hrf.pth: https://dl.dropboxusercontent.com/s/o3edhljeidl6fvi/M2UNet_COVD-HRF.pth -.. _m2unet_covd-hrf_ssl.pth: https://dl.dropboxusercontent.com/s/2e0aq8a5vbop2yx/M2UNet_COVD-HRF_SSL.pth -.. _m2unet_covd-iostar.pth: https://dl.dropboxusercontent.com/s/t5b2qomq6ey8i9t/M2UNet_COVD-IOSTAR.pth -.. _m2unet_covd-iostar_ssl.pth: https://dl.dropboxusercontent.com/s/70ynm2k3bpkj4mq/M2UNet_COVD-IOSTAR_SSL.pth +.. _driu_chasedb1.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/DRIU_CHASEDB1.pth +.. _driu_drive.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/DRIU_DRIVE.pth +.. _driu_hrf.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/DRIU_HRF1168.pth +.. _driu_stare.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/DRIU_STARE.pth +.. _driu_iostar.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/DRIU_IOSTARVESSEL.pth + +.. _m2unet_chasedb1.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_CHASEDB1.pth +.. _m2unet_drive.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_DRIVE.pth +.. _m2unet_hrf.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_HRF1168.pth +.. _m2unet_stare.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_STARE.pth +.. _m2unet_iostar.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_IOSTARVESSEL.pth +.. _m2unet_covd-drive.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-DRIVE.pth +.. _m2unet_covd-drive_ssl.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-DRIVE_SSL.pth +.. _m2unet_covd-stare.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-STARE.pth +.. _m2unet_covd-stare_ssl.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-STARE_SSL.pth +.. _m2unet_covd-chaesdb1.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-CHASEDB1.pth +.. _m2unet_covd-chaesdb1_ssl.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-CHASEDB1_SSL.pth +.. _m2unet_covd-hrf.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-HRF.pth +.. _m2unet_covd-hrf_ssl.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-HRF_SSL.pth +.. _m2unet_covd-iostar.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-IOSTAR.pth +.. _m2unet_covd-iostar_ssl.pth: https://www.idiap.ch/software/bob/data/bob/bob.ip.binseg/master/M2UNet_COVD-IOSTAR_SSL.pth