From 17154dbb223cf11897c173a4e3c6fdc771d137e9 Mon Sep 17 00:00:00 2001
From: Tim Laibacher <tim.laibacher@idiap.ch>
Date: Mon, 12 Aug 2019 16:42:02 +0200
Subject: [PATCH] Remove pdfcreator
---
bob/ip/binseg/script/binseg.py | 1 -
bob/ip/binseg/utils/rsttable.py | 20 +++++++++++++++++++-
2 files changed, 19 insertions(+), 2 deletions(-)
diff --git a/bob/ip/binseg/script/binseg.py b/bob/ip/binseg/script/binseg.py
index 44166070..b68b8a0c 100644
--- a/bob/ip/binseg/script/binseg.py
+++ b/bob/ip/binseg/script/binseg.py
@@ -28,7 +28,6 @@ from bob.ip.binseg.engine.ssltrainer import do_ssltrain
from bob.ip.binseg.engine.inferencer import do_inference
from bob.ip.binseg.utils.plot import plot_overview
from bob.ip.binseg.utils.click import OptionEatAll
-from bob.ip.binseg.utils.pdfcreator import create_pdf, get_paths
from bob.ip.binseg.utils.rsttable import create_overview_grid
from bob.ip.binseg.utils.plot import metricsviz, overlay,savetransformedtest
from bob.ip.binseg.utils.transformfolder import transformfolder as transfld
diff --git a/bob/ip/binseg/utils/rsttable.py b/bob/ip/binseg/utils/rsttable.py
index 1db04e45..bab97608 100644
--- a/bob/ip/binseg/utils/rsttable.py
+++ b/bob/ip/binseg/utils/rsttable.py
@@ -1,8 +1,26 @@
-from bob.ip.binseg.utils.pdfcreator import get_paths
import pandas as pd
from tabulate import tabulate
import os
+def get_paths(output_path, filename):
+ """
+ Parameters
+ ----------
+ output_path : str
+ path in which to look for files
+ filename : str
+
+ Returns
+ -------
+ list
+ list of file paths
+ """
+ datadir = Path(output_path)
+ file_paths = sorted(list(datadir.glob('**/{}'.format(filename))))
+ file_paths = [f.as_posix() for f in file_paths]
+ return file_paths
+
+
def create_overview_grid(output_path):
""" Reads all Metrics.csv in a certain output path and pivots them to a rst grid table"""
filename = 'Metrics.csv'
--
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