diff --git a/bob/ip/binseg/data/refuge/__init__.py b/bob/ip/binseg/data/refuge/__init__.py index 717d6cdd4345abc0f4a471cf5e5aba82c5bff2dc..d96db5ec2bb9a095480fa893f441a50a6b1c2bbb 100644 --- a/bob/ip/binseg/data/refuge/__init__.py +++ b/bob/ip/binseg/data/refuge/__init__.py @@ -8,29 +8,28 @@ challenge. The goal of the challenge is to evaluate and compare automated algorithms for glaucoma detection and optic disc/cup segmentation on a common dataset of retinal fundus images. -* Reference: [REFUGE-2018]_ +* Reference (including train/dev/test split): [REFUGE-2018]_ * Protocols ``optic-disc`` and ``cup``: - * Training samples: - * 400 - * includes optic-disc and cup labels - * includes label: glaucomatous and non-glaucomatous - * original resolution: 2056 x 2124 - * Validation samples: 400: - * 400 - * includes optic-disc and cup labels - * original resolution: 1634 x 1634 - * Test samples: - * 400 - * includes optic-disc and cup labels - * includes label: glaucomatous and non-glaucomatous - * original resolution: -* Split reference: [REFUGE-2018]_ - -.. warning: - - Notice that the data cropping/resizing algorithm applied on training and - "validation" data are slightly different and need to be cross-checked. + * Training samples: + + * 400 + * includes optic-disc and cup labels + * includes label: glaucomatous and non-glaucomatous + * original resolution: 2056 x 2124 + + * Validation samples: + + * 400 + * includes optic-disc and cup labels + * original resolution: 1634 x 1634 + + * Test samples: + + * 400 + * includes optic-disc and cup labels + * includes label: glaucomatous and non-glaucomatous + * original resolution: """ import os diff --git a/doc/api.rst b/doc/api.rst index 0036375949015087c16898f58d9a08350ab2037d..84b50c5b50080b2fc6624dd341241fda0430d952 100644 --- a/doc/api.rst +++ b/doc/api.rst @@ -36,6 +36,7 @@ Datasets bob.ip.binseg.data.chasedb1 bob.ip.binseg.data.hrf bob.ip.binseg.data.iostar + bob.ip.binseg.data.refuge Engines @@ -171,8 +172,11 @@ Datasets bob.ip.binseg.configs.datasets.dristhigs1_od_test bob.ip.binseg.configs.datasets.refuge_cup + bob.ip.binseg.configs.datasets.refuge_cup_dev + bob.ip.binseg.configs.datasets.refuge_cup_test bob.ip.binseg.configs.datasets.refuge_cup_test bob.ip.binseg.configs.datasets.refuge_od + bob.ip.binseg.configs.datasets.refuge_od_dev bob.ip.binseg.configs.datasets.refuge_od_test bob.ip.binseg.configs.datasets.rimoner3_cup diff --git a/doc/datasets.rst b/doc/datasets.rst index 61bacb0d5e7cd5b5a5bae34efaafdd07884d3ca5..54092eb42528991402522ae8c8d7d322a3603609 100644 --- a/doc/datasets.rst +++ b/doc/datasets.rst @@ -113,27 +113,16 @@ to generate iterators for training and testing. - [DRISHTIGS1-2014]_ - 50 - 51 - * - REFUGE_ (train) + * - REFUGE_ - [REFUGE-2018]_ - - 2056 x 2124 - - 400 + - 2056 x 2124 (1634 x 1634) + - 1200 (400+400+400) - - - x - x - [REFUGE-2018]_ - - 400 - - - * - REFUGE_ (val) - - [REFUGE-2018]_ - - 1634 x 1634 - - 400 - - - - - - x - - x - - [REFUGE-2018]_ - - + - 400 (+400) - 400