bob issueshttps://gitlab.idiap.ch/groups/bob/-/issues2018-07-10T08:08:57Zhttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/119bob.bio.baselines always calls verify.py but for some baselines it's better t...2018-07-10T08:08:57ZAmir MOHAMMADIbob.bio.baselines always calls verify.py but for some baselines it's better to call verify_{gmm,isv,ivector}.pyTiago de Freitas PereiraTiago de Freitas Pereirahttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/118baselines' other parts could be changed based on database2018-05-18T15:11:25ZAmir MOHAMMADIbaselines' other parts could be changed based on databaseI noticed that in bob.bio.spear not only preprocessors are changed but hyper parameters of algorithms are also changed for each database and baseline combination. See for example: https://www.idiap.ch/software/bob/docs/bob/bob.bio.spear/...I noticed that in bob.bio.spear not only preprocessors are changed but hyper parameters of algorithms are also changed for each database and baseline combination. See for example: https://www.idiap.ch/software/bob/docs/bob/bob.bio.spear/v3.2.0/baselines.html#voxforge-dataset
cref: https://gitlab.idiap.ch/bob/bob.bio.spear/issues/33https://gitlab.idiap.ch/bob/bob.bio.spear/-/issues/33The baselines need to be ported to bob.bio.baseline format2020-10-08T07:16:22ZAmir MOHAMMADIThe baselines need to be ported to bob.bio.baseline formatAlso, I noticed that in bob.bio.spear not only preprocessors are changed but hyper parameters of algorithms are also changed for each database and baseline combination. See for example: https://www.idiap.ch/software/bob/docs/bob/bob.bio....Also, I noticed that in bob.bio.spear not only preprocessors are changed but hyper parameters of algorithms are also changed for each database and baseline combination. See for example: https://www.idiap.ch/software/bob/docs/bob/bob.bio.spear/v3.2.0/baselines.html#voxforge-datasethttps://gitlab.idiap.ch/bob/bob.bio.video/-/issues/12Cannot run bob.bio.baselines of face images on video databases2018-05-23T13:29:02ZAmir MOHAMMADICannot run bob.bio.baselines of face images on video databasesAfter the introduction of baselines: https://www.idiap.ch/software/bob/docs/bob/docs/master/bob.bio.base/doc/baseline.html
I noticed that I cannot run face baselines on video databases.
The preprocessor, extractor, and algorithm need to...After the introduction of baselines: https://www.idiap.ch/software/bob/docs/bob/docs/master/bob.bio.base/doc/baseline.html
I noticed that I cannot run face baselines on video databases.
The preprocessor, extractor, and algorithm need to be wrapped inside bob.bio.video classes.
What do you think is the best approach to do this?https://gitlab.idiap.ch/bob/nightlies/-/issues/36Nightlies down2018-05-19T07:15:10ZTiago de Freitas PereiraNightlies downWe are not lucky,
Just to let you know, both runners were down this morning (I couldn't SSH).
I rebooted and now everything is fine.
ping @amohammadi @andre.anjosWe are not lucky,
Just to let you know, both runners were down this morning (I couldn't SSH).
I rebooted and now everything is fine.
ping @amohammadi @andre.anjoshttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/117Follow-up from "Fixes in ROC and DET labels"2018-05-17T13:16:36ZAmir MOHAMMADIFollow-up from "Fixes in ROC and DET labels"The following discussion from !154 should be addressed:
- [ ] @tiago.pereira started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/154#note_29984): (+5 comments)
> Somehow this screwed the CMC plotThe following discussion from !154 should be addressed:
- [ ] @tiago.pereira started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/154#note_29984): (+5 comments)
> Somehow this screwed the CMC plotAmir MOHAMMADIAmir MOHAMMADIhttps://gitlab.idiap.ch/bob/bob.measure/-/issues/40--no-semilogx is ignored in ROC curves2018-05-17T12:05:44ZAmir MOHAMMADI--no-semilogx is ignored in ROC curvesPassing `--no-semilogx` has no effect on the output. Maybe the best solution is to add this option to `bob.measure.plot.roc_for_far`.Passing `--no-semilogx` has no effect on the output. Maybe the best solution is to add this option to `bob.measure.plot.roc_for_far`.Amir MOHAMMADIAmir MOHAMMADIhttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/116Baseline subdirectory should not contain the name of the database2018-05-24T18:40:45ZAmir MOHAMMADIBaseline subdirectory should not contain the name of the databaseThe following discussion from !151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29931):
> @tiago.pereira this is not good. because verify.py already...The following discussion from !151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29931):
> @tiago.pereira this is not good. because verify.py already creates the database folder. I am running the baselines locally and they get saved in `/temp/amohammadi/atnt/atnt/eigenface/preprocessed` ... which is repeating the atnt name twice.Tiago de Freitas PereiraTiago de Freitas Pereirahttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/115Forever branches2018-05-25T06:24:05ZTiago de Freitas PereiraForever branchesHey guys,
Shall we clean up some branches??
Look at the list below. Some are two years old:
- [ ] https://gitlab.idiap.ch/bob/bob.bio.base/tree/train-on-models
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/manuels
- [x] https:...Hey guys,
Shall we clean up some branches??
Look at the list below. Some are two years old:
- [ ] https://gitlab.idiap.ch/bob/bob.bio.base/tree/train-on-models
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/manuels
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/52-file-list-database-is-not-tested-anymore
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/doc-clean-up
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/bio
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/keyword
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/linestyles
- [x] https://gitlab.idiap.ch/bob/bob.bio.base/tree/amirhttps://gitlab.idiap.ch/bob/bob.extension/-/issues/64ResourceOption cannot load variables from entrypoints.2018-07-16T16:23:18ZAmir MOHAMMADIResourceOption cannot load variables from entrypoints.The problem is when you have entrypoints like:
```
'local-p4 = bob.bio.base.config.grid.local:grid',
'local-p8 = bob.bio.base.config.grid.local:grid_p8',
'local-p16 = bob.bio.base.config....The problem is when you have entrypoints like:
```
'local-p4 = bob.bio.base.config.grid.local:grid',
'local-p8 = bob.bio.base.config.grid.local:grid_p8',
'local-p16 = bob.bio.base.config.grid.local:grid_p16',
```
we usually cannot load them using the ResourceOption class when variable name is something else.
Follow-up from "Created the Baselines Concept" The following discussion from bob.bio.base!151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group name here and it will load the baseline for you. You don't need to load the baseline manually.
Amir MOHAMMADIAmir MOHAMMADIhttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/114Follow-up from "Created the Baselines Concept"2018-07-17T10:27:36ZAmir MOHAMMADIFollow-up from "Created the Baselines Concept"The following discussion from bob.bio.base!151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group...The following discussion from bob.bio.base!151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group name here and it will load the baseline for you. You don't need to load the baseline manually.https://gitlab.idiap.ch/bob/bob.extension/-/issues/57Follow-up from "Created the Baselines Concept"2018-07-10T12:01:36ZAmir MOHAMMADIFollow-up from "Created the Baselines Concept"The following discussion from bob.bio.base!151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group...The following discussion from bob.bio.base!151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group name here and it will load the baseline for you. You don't need to load the baseline manually.https://gitlab.idiap.ch/bob/bob.bio.base/-/issues/113Follow-up from "Created the Baselines Concept"2018-05-16T14:01:25ZAmir MOHAMMADIFollow-up from "Created the Baselines Concept"The following discussion from !151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group name here a...The following discussion from !151 should be addressed:
- [ ] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/151#note_29783): (+10 comments)
> Just give the entry point group name here and it will load the baseline for you. You don't need to load the baseline manually.https://gitlab.idiap.ch/bob/bob.bio.base/-/issues/112Severe Issue `bob bio metric`2018-07-10T07:19:04ZTiago de Freitas PereiraSevere Issue `bob bio metric`Guys,
The majority (if not all) of the metrics implemented in `bob bio` relies on a `dev` `eval` sets.
Excluding the `EPC` curve, whose `dev` and `eval` sets are necessary for the computation of the curve, this is not a requirement for...Guys,
The majority (if not all) of the metrics implemented in `bob bio` relies on a `dev` `eval` sets.
Excluding the `EPC` curve, whose `dev` and `eval` sets are necessary for the computation of the curve, this is not a requirement for the rest of the metrics in biometrics (and doesn't make sense).
Furthermore, most of the databases we have don't have the pair `dev` and `eval`.
I guess only the ones we created the protocol ourselves have these sets.
How can I use `bob bio metric` if my dataset has only a dev set?
For instance, if I try to plot a ROC curve I get:
```
bob bio roc ./scores-dev -o my-roc.pdf
Error: Invalid value for "scores": The number of provided scores must be > 0 and a multiple of 2 because the following files are required:
- 1 development file(s)
- 1 evaluation file(s)
```
This is a severe issue.
For instance, I can't use these scripts for my work (only through a hack)
ping @theophile.gentilhomme and @amohammadihttps://gitlab.idiap.ch/bob/bob.db.swan/-/issues/1Nightlies SAGA2018-05-16T11:16:00ZTiago de Freitas PereiraNightlies SAGAGuys,
Nightlies are broken here
https://gitlab.idiap.ch/bob/bob.nightlies/-/jobs/136291
This is not even a conda package, why is it there?
Could you please take care of this @amohammadi ?
ThanksGuys,
Nightlies are broken here
https://gitlab.idiap.ch/bob/bob.nightlies/-/jobs/136291
This is not even a conda package, why is it there?
Could you please take care of this @amohammadi ?
Thankshttps://gitlab.idiap.ch/bob/bob.bio.base/-/issues/111Follow-up from "Exposing the method groups in our FileDatabase API"2018-05-17T09:07:57ZAmir MOHAMMADIFollow-up from "Exposing the method groups in our FileDatabase API"The following discussion from !150 should be addressed:
- [x] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/150#note_29656):
> either the docs are wrong or you didn't implement the prot...The following discussion from !150 should be addressed:
- [x] @amohammadi started a [discussion](https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/150#note_29656):
> either the docs are wrong or you didn't implement the protocol parameter.Tiago de Freitas PereiraTiago de Freitas Pereirahttps://gitlab.idiap.ch/bob/bob.bio.face/-/issues/31Nightlies are failing because of this one2018-05-16T06:13:22ZTiago de Freitas PereiraNightlies are failing because of this oneHi guys,
The nightly builds are failing, because of this one https://gitlab.idiap.ch/bob/bob.nightlies/-/jobs/136039
The current `baseline` script is trying to run the `evaluate` script that was already deleted.
I'm offering three pos...Hi guys,
The nightly builds are failing, because of this one https://gitlab.idiap.ch/bob/bob.nightlies/-/jobs/136039
The current `baseline` script is trying to run the `evaluate` script that was already deleted.
I'm offering three possibilities to solve this one today:
- Disable the baseline unit tests until we solve the issues with the baseline script (https://gitlab.idiap.ch/bob/bob.bio.face/blob/49f48337ba2818dc8b3f64d88ccf76495209ac4b/bob/bio/face/test/test_scripts.py#L5)
- Completely remove the `baseline` script until we decide what to do with it
- Move forward with this one https://gitlab.idiap.ch/bob/bob.bio.face/merge_requests/49 . Here I'm offering a clean solution to solve the above issues. I could document it and merge it today to solve this issue, but I would appreciate a feedback
Feedback please.
2 weeks of red nightlies
ping @bob
Thankshttps://gitlab.idiap.ch/bob/nightlies/-/issues/35Nighlies are broken2018-05-14T09:17:55ZTiago de Freitas PereiraNighlies are brokenHi guys,
Nightlies are broken and I need some help to fix it.
Look at the logs
https://gitlab.idiap.ch/bob/bob.nightlies/-/jobs/135856
We are pinning `hdf5` to `1.10.1` in `bob-devel` (https://gitlab.idiap.ch/bob/bob.conda/blob/master...Hi guys,
Nightlies are broken and I need some help to fix it.
Look at the logs
https://gitlab.idiap.ch/bob/bob.nightlies/-/jobs/135856
We are pinning `hdf5` to `1.10.1` in `bob-devel` (https://gitlab.idiap.ch/bob/bob.conda/blob/master/conda/bob-devel/meta.yaml#L36), but it looks like `bob.io.base` is requiring something higher than `1.10.2`.
Sorry, but I don't know all the idiosyncrasies of conda packaging. Is this jinja variable https://gitlab.idiap.ch/bob/bob.io.base/blob/master/conda/meta.yaml#L32 forcing the conda package to pick the highest version available in the channels we point?
Nightlies are broken for 2 weeks.
Let's make an effort to make it green for this week, please.
ping @andre.anjos @amohammadi
Cheershttps://gitlab.idiap.ch/bob/bob.db.base/-/issues/23Add bob.db.nist_sre16 package2018-05-08T12:09:42ZSaeed SARFJOOAdd bob.db.nist_sre16 packagePlease create this package in the bob project and give me the owner permission.Please create this package in the bob project and give me the owner permission.Amir MOHAMMADIAmir MOHAMMADIhttps://gitlab.idiap.ch/bob/bob.bio.face/-/issues/30Script broken by bob.bio.base merge2018-05-17T14:18:33ZTheophile GENTILHOMMEScript broken by bob.bio.base mergeBroken by https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/146
baselines.py is using evaluate.py that has been removed.Broken by https://gitlab.idiap.ch/bob/bob.bio.base/merge_requests/146
baselines.py is using evaluate.py that has been removed.Theophile GENTILHOMMETheophile GENTILHOMME