diff --git a/conda/beat-devel/meta.yaml b/conda/beat-devel/meta.yaml index 0cbf2a67d1214ea89e1973f935ad8b73ce676297..9f903ce574f3be2aed5afdae393a9feed8ccb719 100644 --- a/conda/beat-devel/meta.yaml +++ b/conda/beat-devel/meta.yaml @@ -2,7 +2,7 @@ {% set nopin = ['ca-certificates', 'certifi', 'openssl', 'libstdcxx-ng', 'libgcc-ng', 'libcxx', 'libcxxabi'] %} package: name: beat-devel - version: 2019.10.17 + version: 2019.12.19 build: # the build number must be zero all the time. @@ -15,17 +15,17 @@ build: requirements: host: - python {{ python }} - - bob-devel 2019.10.17 + - bob-devel 2019.12.19 - docker-py 4.0.2 - - flask 1.0.2 - - flask-cors 3.0.7 + - flask 1.0.3 + - flask-cors 3.0.8 - flask-restful 0.3.6 - - jsonschema 3.0.1 + - jsonschema 3.0.2 - nodejs 8.9.3 - python-graphviz 0.8.4 - pyzmq 17.1.2 - - simplejson 3.16.0 - - sphinxcontrib-programoutput 0.14 + - simplejson 3.17.0 + - sphinxcontrib-programoutput 0.15 - sphinxcontrib-httpdomain 1.7.0 - psycopg2 2.7.6.1 - ncurses 6.1 diff --git a/conda/bob-devel/meta.yaml b/conda/bob-devel/meta.yaml index 4e3b967c50b5e03908b1e259a94e8ab5f930ea0a..63ef10a135da1ce83b0fc2d85a9080082aa1ede9 100644 --- a/conda/bob-devel/meta.yaml +++ b/conda/bob-devel/meta.yaml @@ -4,7 +4,7 @@ package: name: bob-devel # please update the version of beat-devel and update bob-devel's version # there as well in the same merge request. - version: 2019.10.17 + version: 2019.12.19 build: # the build number must be zero all the time. diff --git a/conda/cyvlfeat/meta.yaml b/conda/cyvlfeat/meta.yaml index e65c0f30f18a91df0a02a7a39ca91148b196e14b..0f1d19fef53fef9a925979c875b3aebfcd8e5aae 100644 --- a/conda/cyvlfeat/meta.yaml +++ b/conda/cyvlfeat/meta.yaml @@ -12,7 +12,7 @@ source: sha256: {{ sha256 }} build: - number: 0 + number: 1 requirements: build: diff --git a/conda/ffmpeg/meta.yaml b/conda/ffmpeg/meta.yaml index f4413fe279e577974d82bc87d0345fb718cf348f..9164970847f47b43cd9be8b7cb4b265852929f9b 100644 --- a/conda/ffmpeg/meta.yaml +++ b/conda/ffmpeg/meta.yaml @@ -22,7 +22,7 @@ source: sha256: 8fe2d344463dbefc2db4239a4203a55ed0324faceaae57276a40c4fabda84c37 # [win64] build: - number: 1 + number: 2 # The windows build is repacking binaries rather than building from source skip: True # [win] run_exports: diff --git a/conda/ipdb/meta.yaml b/conda/ipdb/meta.yaml index 119728741046621a3f1549e20841362adde09cfd..a551d3a1edf312a554aea6702c13b369854de93e 100644 --- a/conda/ipdb/meta.yaml +++ b/conda/ipdb/meta.yaml @@ -1,4 +1,4 @@ -{% set version = "0.12.2" %} +{% set version = "0.12.3" %} package: name: ipdb @@ -6,7 +6,7 @@ package: source: url: https://pypi.io/packages/source/i/ipdb/ipdb-{{ version }}.tar.gz - sha256: 473fdd798a099765f093231a8b1fabfa95b0b682fce12de0c74b61a4b4d8ee57 + sha256: 5d9a4a0e3b7027a158fc6f2929934341045b9c3b0b86ed5d7e84e409653f72fd build: number: 0 diff --git a/conda/libmatio/build.sh b/conda/libmatio/build.sh index 3af3ce49dc6d12c2800028115738bd1cc8f5ea5d..05f2b3978ff0f656c8289562d5efdbc0b51aa94a 100644 --- a/conda/libmatio/build.sh +++ b/conda/libmatio/build.sh @@ -5,7 +5,8 @@ --enable-extended-sparse \ --prefix="${PREFIX}" \ --with-zlib="${PREFIX}" \ - --with-hdf5="${PREFIX}" + --with-hdf5="${PREFIX}" \ + --with-default-api-version=v110 make if [[ `uname` == 'Darwin' ]]; diff --git a/conda/libmatio/meta.yaml b/conda/libmatio/meta.yaml index a81de75c78ec21c78ce7b4e4c1e0362541228411..eed45e567c4fc34db6785c588a45cfbcac63cdcc 100644 --- a/conda/libmatio/meta.yaml +++ b/conda/libmatio/meta.yaml @@ -1,12 +1,11 @@ -{% set version = "1.5.15" %} +{% set version = "1.5.17" %} package: name: libmatio version: {{ version }} source: - fn: matio-{{ version }}.tar.gz - url: https://github.com/tbeu/matio/releases/download/v{{ version }}/matio-{{ version }}.tar.gz - md5: b1436ac47cf66d53ed9f892d0ae027ca + git_url: https://github.com/tbeu/matio.git + git_rev: {{ version }} build: number: 0 diff --git a/conda/libogg/meta.yaml b/conda/libogg/meta.yaml index 4f3ade9e75ca1d7d826b98de367e0b4116e3555a..5c2c8c29b348b504a582b5d488b03c8f98713db2 100755 --- a/conda/libogg/meta.yaml +++ b/conda/libogg/meta.yaml @@ -12,7 +12,7 @@ source: sha256: {{ sha256 }} build: - number: 1 + number: 2 features: - vc9 # [win and py27] - vc10 # [win and py34] diff --git a/conda/libsvm/meta.yaml b/conda/libsvm/meta.yaml index 119ea523015ffbb39e09c3706605d16943ca64ed..62d44de5f9c4ec18a8a6f4bd1f8c2026d5e2dd3d 100644 --- a/conda/libsvm/meta.yaml +++ b/conda/libsvm/meta.yaml @@ -1,5 +1,6 @@ -{% set version = "3.22" %} +{% set version = "3.24" %} {% set flatversion = version.replace(".", "") %} +{% set sha256 = "3ba1ac74ee08c4dd57d3a9e4a861ffb57dab88c6a33fd53eac472fc84fbb2a8f" %} package: name: libsvm @@ -8,7 +9,7 @@ package: source: fn: libsvm-{{ flatversion }}.tar.gz url: https://github.com/cjlin1/libsvm/archive/v{{ flatversion }}.tar.gz - md5: d9617d29efad013573f63ca9a517f490 + sha256: {{ sha256 }} patches: - win32.patch # [win32] diff --git a/conda/menpo/meta.yaml b/conda/menpo/meta.yaml index 37c3498a27af6f1ed84f359878a123c4a28d0d0c..17cb5c53b88eeaac5d9b17557a45446b8a60a112 100644 --- a/conda/menpo/meta.yaml +++ b/conda/menpo/meta.yaml @@ -1,6 +1,6 @@ {% set name = "menpo" %} -{% set version = "0.9.1" %} -{% set sha256 = "691f74ec6544bc56753b17a9f72d368f2928eaab5c2bf19673482552631683e9" %} +{% set version = "0.9.2" %} +{% set sha256 = "6d3de6e57886179053caecd7244dbf956d41c1290a7dd9728d1237af0d1dab02" %} package: name: {{ name }} @@ -12,7 +12,7 @@ source: sha256: {{ sha256 }} build: - number: 1 + number: 0 script: python setup.py install --single-version-externally-managed --record=record.txt run_exports: - {{ pin_subpackage(name, max_pin='x.x') }} diff --git a/conda/menpofit/meta.yaml b/conda/menpofit/meta.yaml index f58b106785d64ac2827e3b8691918481026cf445..aa690ef4bb51e9fbbbdf4427ce168675738c8d11 100644 --- a/conda/menpofit/meta.yaml +++ b/conda/menpofit/meta.yaml @@ -9,7 +9,7 @@ source: git_url: https://github.com/menpo/menpofit.git build: - number: 1 + number: 2 script: python setup.py install --single-version-externally-managed --record=record.txt requirements: diff --git a/conda/nasm/meta.yaml b/conda/nasm/meta.yaml index b8046bcded4964ff72ace9fe03860f8f7e52993b..9bc664fb36831db521a9b243f7b5c01acc84a52f 100644 --- a/conda/nasm/meta.yaml +++ b/conda/nasm/meta.yaml @@ -11,7 +11,7 @@ source: sha256: 4749fd76a8a26dc7d8871bc97cc2c16cfa0c933f984a13128e94f464f417531a build: - number: 0 + number: 1 requirements: build: diff --git a/conda/openh264/meta.yaml b/conda/openh264/meta.yaml index cbadca42a8a5382c228569d2a2060a2e37dbcb5f..c4364bdc75e057eb91977dc4a62ca8792daf05f5 100644 --- a/conda/openh264/meta.yaml +++ b/conda/openh264/meta.yaml @@ -13,7 +13,7 @@ source: '{{ hash_type }}': '{{ hash_value }}' build: - number: 1 + number: 2 run_exports: # https://abi-laboratory.pro/tracker/timeline/openh264 - {{ pin_subpackage(name, max_pin='x.x') }} diff --git a/conda/ratelimiter/meta.yaml b/conda/ratelimiter/meta.yaml deleted file mode 100644 index 7bb26bf66c15419a5444bec217e4de3aefad9759..0000000000000000000000000000000000000000 --- a/conda/ratelimiter/meta.yaml +++ /dev/null @@ -1,43 +0,0 @@ -{% set version = "1.2.0.post0" %} - -package: - name: ratelimiter - version: {{ version }} - -source: - fn: ratelimiter-{{ version }}.tar.gz - url: https://pypi.io/packages/source/r/ratelimiter/ratelimiter-{{ version }}.tar.gz - sha256: 5c395dcabdbbde2e5178ef3f89b568a3066454a6ddc223b76473dac22f89b4f7 - -build: - number: 0 - noarch: python - script: python -m pip install --no-deps --ignore-installed . - -requirements: - build: - - pip - - python - - setuptools - run: - - python - -test: - imports: - - ratelimiter - -about: - home: https://github.com/RazerM/ratelimiter - license: Apache-2.0 - license_family: APACHE - license_file: LICENSE - summary: Simple Python module providing rate limiting. - description: | - This package provides the ratelimiter module, which ensures that an operation - will not be executed more than a given number of times on a given period. - This can prove useful when working with third parties APIs which require - for example a maximum of 10 requests per second. - -extra: - recipe-maintainers: - - anjos diff --git a/conda/schema/meta.yaml b/conda/schema/meta.yaml index 351b53bd7a9a1e2a969045402231ec332961f343..febefb5e2f7c728526652c2c7bfe79bdef6f29e1 100644 --- a/conda/schema/meta.yaml +++ b/conda/schema/meta.yaml @@ -1,4 +1,4 @@ -{% set version = "0.7.0" %} +{% set version = "0.7.1" %} package: name: schema @@ -6,10 +6,10 @@ package: source: url: https://pypi.io/packages/source/s/schema/schema-{{ version }}.tar.gz - sha256: 44add3ef9016c85ac4b0291b45286a657d0df309b31528ca8d0a9c6d0aa68186 + sha256: c9dc8f4624e287c7d1435f8fd758f6a0aabbb7eff442db9192cd46f0e2b6d959 build: - number: 1 + number: 0 script: python -m pip install --no-deps --ignore-installed . requirements: @@ -20,7 +20,7 @@ requirements: run: - python - - contextlib2 0.5.5 + - contextlib2 >=0.5.5 test: requires: diff --git a/conda/snakemake/meta.yaml b/conda/snakemake/meta.yaml deleted file mode 100644 index e10040ec33a50196a0337fee71b9eaa0fb83f2be..0000000000000000000000000000000000000000 --- a/conda/snakemake/meta.yaml +++ /dev/null @@ -1,79 +0,0 @@ -{% set version = "5.5.4" %} - -package: - name: snakemake - version: {{ version }} - -source: - url: https://pypi.io/packages/source/s/snakemake/snakemake-{{ version }}.tar.gz - sha256: 44ef8e4d9850b2480f29ddbcc6d57540be9440d1422366bb3bb68e285377a959 - -build: - noarch: python - script: python -m pip install --no-deps --ignore-installed . - entry_points: - - snakemake = snakemake:main - - snakemake-bash-completion = snakemake:bash_completion - -requirements: - host: - - python >=3.5 - - pip - - setuptools - run: - - python >=3.5 - - setuptools - - wrapt - - requests - - docutils - - pyyaml - - datrie - - requests >=2.8.1 - - psutil - - ratelimiter - - configargparse - - appdirs - - jsonschema - - gitpython - - jinja2 - - pygraphviz - - networkx >=2.0 - - dropbox >=7.2.1 - - pygments - # nice optionals not included with the default package - #- ftputil >=3.2 - #- filechunkio >=1.6 - #- pysftp >=0.2.8 - #- aioeasywebdav - #- pandas #not required "required" - #- python-irodsclient - #- google-cloud-storage - #- boto3 - -test: - imports: - - snakemake - commands: - - export GIT\_PYTHON_REFRESH=warn - - snakemake --version - - snakemake --version | grep "{{ version }}" - -about: - home: https://snakemake.readthedocs.io - license: MIT - summary: A popular workflow management system aiming at full in-silico reproducibility. - description: | - Snakemake is a workflow management system that aims to reduce the - complexity of creating workflows by providing a fast and comfortable - execution environment, together with a clean and modern specification - language in python style. Snakemake workflows are essentially Python - scripts extended by declarative code to define rules. Rules describe how to - create output files from input files. This installation is copied from - bioconda and contains a more or less "packed" setup, with most used - functionality. - -extra: - skip-lints: - - uses_setuptools # uses pkg_resoures during run time - recipe-maintainers: - - anjos diff --git a/conda/sox/meta.yaml b/conda/sox/meta.yaml index 0ecc1073eaff171039c670c5e9fac0e65ddb39e2..a4c4b50cc2d8478686ce069a0529e6d86058c36e 100644 --- a/conda/sox/meta.yaml +++ b/conda/sox/meta.yaml @@ -11,7 +11,7 @@ source: md5: d04fba2d9245e661f245de0577f48a33 build: - number: 7 + number: 8 detect_binary_files_with_prefix: true skip: true # [win] run_exports: diff --git a/conda/sphinxcontrib-httpdomain/meta.yaml b/conda/sphinxcontrib-httpdomain/meta.yaml index 47494df035ede39123df69c3b0639c0c64c59fe4..f283b89f819e8e1bf1fef040922832734e3198a3 100644 --- a/conda/sphinxcontrib-httpdomain/meta.yaml +++ b/conda/sphinxcontrib-httpdomain/meta.yaml @@ -10,7 +10,7 @@ source: sha256: ac40b4fba58c76b073b03931c7b8ead611066a6aebccafb34dc19694f4eb6335 build: - number: 0 + number: 1 script: "{{ PYTHON }} -m pip install --no-deps --ignore-installed --no-cache-dir ." requirements: diff --git a/conda/sphinxcontrib-programoutput/meta.yaml b/conda/sphinxcontrib-programoutput/meta.yaml index abb1662b59aa495a6b45b374040039861bd05f97..94d3110bad8ebfb8a4f85f78ce42da02ee2c5906 100644 --- a/conda/sphinxcontrib-programoutput/meta.yaml +++ b/conda/sphinxcontrib-programoutput/meta.yaml @@ -1,6 +1,6 @@ {% set name = "sphinxcontrib-programoutput" %} -{% set version = "0.14" %} -{% set sha256 = "75b182e9e8cf7efe828cac2c351bb737b00a76bc3aa60fd1a9b2b7096e99c383" %} +{% set version = "0.15" %} +{% set sha256 = "80dd5b4eab780a13ff2c23500cac3dbf0e04ef9976b409ef25a47c263ef8ab94" %} package: name: {{ name|lower }} diff --git a/conda/zc.buildout/meta.yaml b/conda/zc.buildout/meta.yaml index c0c1e09d262cf65c481287f8b9a6a7fcbc8c22ca..282370161590f805f86ac2d67fab6cb08103df1e 100644 --- a/conda/zc.buildout/meta.yaml +++ b/conda/zc.buildout/meta.yaml @@ -9,7 +9,7 @@ source: git_url: https://github.com/buildout/buildout.git build: - number: 0 + number: 1 script: python setup.py install --single-version-externally-managed --record=record.txt entry_points: diff --git a/python.txt b/python.txt index 2d8dba0e7ffbf31fdbb180aa23879a45cc3959bf..3d4cb285efebcefa33982f1383be5c231264d31d 100644 --- a/python.txt +++ b/python.txt @@ -21,7 +21,5 @@ conda/nodeenv conda/pre-commit conda/pytest-qt conda/ddt -conda/ratelimiter -conda/snakemake conda/bob-devel conda/beat-devel