Problem to save a linear machine
I had a problem to save a linear machine otained by CGLogRegTrainer using the function "save(HDF5File)". I got the following error: """ Warning! HDF5 library version mismatched error The HDF5 header files used to compile this application do not match the version used by the HDF5 library to which this application is linked. Data corruption or segmentation faults may occur if the application continues. This can happen when an application was compiled by one version of HDF5 but linked with a different version of static or shared HDF5 library. You should recompile the application or check your shared library related settings such as 'LD_LIBRARY_PATH'. You can, at your own risk, disable this warning by setting the environment variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'. Setting it to 2 or higher will suppress the warning messages totally. Headers are 1.8.16, library is 1.8.17 SUMMARY OF THE HDF5 CONFIGURATION =================================
General Information:
HDF5 Version: 1.8.17
Configured on: Mon May 30 18:15:07 UTC 2016
Configured by: root@99f755eee234
Configure mode: production
Host system: x86_64-unknown-linux-gnu
Uname information: Linux 99f755eee234 3.13.0-86-generic #131-Ubuntu SMP Thu May 12 23:33:13 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux
Byte sex: little-endian
Libraries: static, shared
Installation point: /idiap/home/cfinelli/.conda/envs/biowave
Compiling Options:
Compilation Mode: production
C Compiler: /opt/rh/devtoolset-2/root/usr/bin/gcc ( gcc (GCC) 4.8.2 20140120 )
CFLAGS:
H5_CFLAGS: -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wstrict-overflow -Wlogical-op -Wlarger-than=2048 -Wvla -Wsync-nand -Wframe-larger-than=16384 -Wpacked-bitfield-compat -Wstrict-overflow=5 -Wjump-misses-init -Wdouble-promotion -Wsuggest-attribute=const -Wtrampolines -Wstack-usage=8192 -Wvector-operation-performance -Wsuggest-attribute=pure -Wsuggest-attribute=noreturn -Wsuggest-attribute=format -O3
AM_CFLAGS:
CPPFLAGS:
H5_CPPFLAGS: -D_GNU_SOURCE -D_POSIX_C_SOURCE=200112L -DNDEBUG -UH5_DEBUG_API
AM_CPPFLAGS: -I/idiap/home/cfinelli/.conda/envs/biowave/include
Shared C Library: yes
Static C Library: yes
Statically Linked Executables: no LDFLAGS: H5_LDFLAGS: AM_LDFLAGS: -L/idiap/home/cfinelli/.conda/envs/biowave/lib Extra libraries: -lrt -lz -ldl -lm Archiver: ar Ranlib: ranlib Debugged Packages: API Tracing: no
Languages:
Fortran: no
C++: yes
C++ Compiler: /opt/rh/devtoolset-2/root/usr/bin/g++ ( g++ (GCC) 4.8.2 20140120 )
C++ Flags:
H5 C++ Flags:
AM C++ Flags:
Shared C++ Library: yes
Static C++ Library: yes
Features:
Parallel HDF5: no
High Level library: yes
Threadsafety: no
Default API Mapping: v18
With Deprecated Public Symbols: yes I/O filters (external): deflate(zlib) MPE: no Direct VFD: no dmalloc: no Clear file buffers before write: yes Using memory checker: no Function Stack Tracing: no Strict File Format Checks: no Optimization Instrumentation: no Bye... Aborted """ From my point of view, I would say I have to update the bob version I have. Am I correct?