`bdt` assumes `mamba` to be in base environment
I have just installed bob.devtools
to develop a local package. To not screw up my base environment, I have installed mamba
and bob.devtools
in a separate conda environment:
conda create -n bob-devel python=3.8 mamba -c conda-forge
conda activate bob-devel
mamba install bob.devtools -c https://www.idiap.ch/software/bob/conda/label/beta/ -c conda-forge
When I now want to build my-package
, I get the following error message:
(bob-devel)$ bdt create -vv my-package
...
Traceback (most recent call last):
File ".../miniconda/envs/ijbc/bin/bdt", line 11, in <module>
sys.exit(main())
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/click/core.py", line 1128, in __call__
return self.main(*args, **kwargs)
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/click/core.py", line 1053, in main
rv = self.invoke(ctx)
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/click/core.py", line 1659, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/click/core.py", line 1395, in invoke
return ctx.invoke(self.callback, **ctx.params)
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/click/core.py", line 754, in invoke
return __callback(*args, **kwargs)
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/bob/devtools/scripts/bdt.py", line 43, in _decorator
value = view_func(*args, **kwargs)
File "/.../miniconda/envs/ijbc/lib/python3.8/site-packages/bob/devtools/scripts/create.py", line 272, in create
conda_create(
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/bob/devtools/build.py", line 413, in conda_create
envdir = get_env_directory(conda, name)
File ".../miniconda/envs/ijbc/lib/python3.8/site-packages/bob/devtools/build.py", line 362, in get_env_directory
output = subprocess.check_output(cmd)
File ".../miniconda/envs/ijbc/lib/python3.8/subprocess.py", line 415, in check_output
return run(*popenargs, stdout=PIPE, timeout=timeout, check=True,
File ".../miniconda/envs/ijbc/lib/python3.8/subprocess.py", line 493, in run
with Popen(*popenargs, **kwargs) as process:
File ".../miniconda/envs/ijbc/lib/python3.8/subprocess.py", line 858, in __init__
self._execute_child(args, executable, preexec_fn, close_fds,
File ".../miniconda/envs/ijbc/lib/python3.8/subprocess.py", line 1704, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: '.../miniconda/bin/mamba'
This seems that the script looks for mamba
in the base environment, but actually it is only in my current environment:
(bob-devel)$ which mamba
.../miniconda/envs/bob-devel/bin/mamba
Is there a way to use mamba
from my current environment?