Commits · e8e89d371fb08657a3b96fa7fb68c2a1cd0b62ca · bob / bob.bio.vein

12 Oct, 2017 40 commits
- Fix link · e8e89d37
  André Anjos authored Oct 09, 2017
  
  e8e89d37
- Update comment · 0a0132c7
  André Anjos authored Oct 06, 2017
  
  0a0132c7
- Set better defaults and use them on stock configuration · 05980774
  André Anjos authored Oct 06, 2017
  
  05980774
- Add watershed preprocessing debug-aid script · ccf7e54c
  André Anjos authored Oct 05, 2017
  
  ccf7e54c
- Printout metrics as they are evaluated · dbdadf96
  André Anjos authored Oct 05, 2017
  
  dbdadf96
- Allow separate thresholds for foreground and background markers; Allow... · 01954bda
  André Anjos authored Oct 05, 2017
```
Allow separate thresholds for foreground and background markers; Allow external utility to use watershed masker
```
  01954bda
- Use simpler validation · 732e42f9
  André Anjos authored Oct 05, 2017
  
  732e42f9
- Add script to help debugging watershedding · fe2f04c1
  André Anjos authored Oct 05, 2017
  
  fe2f04c1
- Fix spelling · 483e6b5b
  André Anjos authored Oct 05, 2017
  
  483e6b5b
- Fix indentation · 60ec408b
  André Anjos authored Sep 22, 2017
  
  60ec408b
- Allow to view sample using a database name · 7d4f35d3
  André Anjos authored Sep 22, 2017
  
  7d4f35d3
- Fixes to marker detector · 12b3da0c
  André Anjos authored Sep 21, 2017
  
  12b3da0c
- Add ON's miura-match with rotation support · fab9c86e
  André Anjos authored Sep 05, 2017
  
  fab9c86e
- Load only what is annotated (allow flexibility) · dafa65b0
  André Anjos authored Sep 04, 2017
  
  dafa65b0
- Support view mode w/o extracted veins · 9a317867
  André Anjos authored Sep 01, 2017
  
  9a317867
- Add mlp trainer for watershed masker · 1060d415
  André Anjos authored Sep 01, 2017
  
  1060d415
- Add mlp trainer for watershed masker · eb0079a5
  André Anjos authored Sep 01, 2017
  
  eb0079a5
- Add watershed mask detector · 309ecf20
  André Anjos authored Sep 01, 2017
  
  309ecf20
- Remove useless mask(); Update comments · e83cbc12
  André Anjos authored Sep 01, 2017
  
  e83cbc12
- Fix score splitting · b4fa451f
  Vedrana KRIVOKUCA authored Aug 24, 2017
  
  b4fa451f
- Improve comments on TomesLeeMask · 8794a2db
  André Anjos authored Aug 22, 2017
  
  8794a2db
- Use padder by default on stock configurations · 885c641c
  André Anjos authored Aug 21, 2017
  
  885c641c
- Fix missing transposition on port · 597fa1be
  André Anjos authored Aug 21, 2017
  
  597fa1be
- Implemented normalized-cross-correlation algorithm · 68a56f1b
  André Anjos authored Jul 10, 2017
  
  68a56f1b
- Remove ipdb break point · 46073599
  André Anjos authored Jul 07, 2017
  
  46073599
- Fix doc error · f3b1d046
  André Anjos authored Jul 07, 2017
  
  f3b1d046
- Test cropping with annotated images · 19e4980d
  André Anjos authored Jul 07, 2017
  
  19e4980d
- Use cropped images on next stages · d3f2e266
  André Anjos authored Jul 07, 2017
  
  d3f2e266
- More tests for preprocessor specific stages · 39960743
  André Anjos authored Jul 07, 2017
  
  39960743
- Reflected changes from copper->crop renaming · 6026bd8b
  André Anjos authored Jul 07, 2017
  
  6026bd8b
- Don't need to do poly_to_mask() anymore · 2274b531
  André Anjos authored Jul 07, 2017
  
  2274b531
- Use 'crop' instead of 'cropper' · 8ef7a589
  André Anjos authored Jul 07, 2017
  
  8ef7a589
- Improve inheritance; Fix FixedMask implementation · 817f25cf
  André Anjos authored Jul 07, 2017
  
  817f25cf
- If sample does not have roi, then returns only image · 0a6b3b74
  André Anjos authored Jul 06, 2017
  
  0a6b3b74
- Add grid resources and explanation on how to run · 98f7c7ac
  André Anjos authored Jul 06, 2017
  
  98f7c7ac
- Implement optional pre-cropping stage on preprocessor · ec4f798d
  André Anjos authored Jul 06, 2017
  
  ec4f798d
- Ensures input image has dtype==float64 before anything else · 2bbaa2db
  André Anjos authored Jul 03, 2017
  
  2bbaa2db
- Fix loading of fv3d fingers · a8586e10
  André Anjos authored Jul 03, 2017
  
  a8586e10
- Missing import · b6acc543
  André Anjos authored Jul 03, 2017
  
  b6acc543
- Avoid warnings · 0ce55c78
  André Anjos authored Jul 03, 2017
  
  0ce55c78