bob.bio.base merge requestshttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests2023-10-31T14:36:37Zhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/323docs: remove refs to bob.extension and clean deps.2023-10-31T14:36:37ZYannick DAYERdocs: remove refs to bob.extension and clean deps.Remove the dependency to "child" packages for the documentation as it breaks the release process.Remove the dependency to "child" packages for the documentation as it breaks the release process.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/322meta(deps): add bob as dependency in new structure2023-06-14T13:54:26ZYannick DAYERmeta(deps): add bob as dependency in new structureAdapt to the new structure of bob with `bob/bob` on top.
Moved the `resources.py` script to a click command.Adapt to the new structure of bob with `bob/bob` on top.
Moved the `resources.py` script to a click command.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/321meta [readme]: Switch the readme.rst to markdown2023-05-11T10:17:43ZYannick DAYERmeta [readme]: Switch the readme.rst to markdownRenames README.rst to README.md to be supported by the release script.Renames README.rst to README.md to be supported by the release script.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/320fix [CSVDatabase]: defining templates metadata.2023-04-04T18:00:05ZYannick DAYERfix [CSVDatabase]: defining templates metadata.Adds a parameter to `CSVDatabase` to indicate which `Sample`'s attributes must be present in their template `SampleSet`.
Adds a unique `key` attribute to the template `SampleSet`.
Adds tests to verify the correct loading of template me...Adds a parameter to `CSVDatabase` to indicate which `Sample`'s attributes must be present in their template `SampleSet`.
Adds a unique `key` attribute to the template `SampleSet`.
Adds tests to verify the correct loading of template metadata in `SampleSet`.
fixes #191.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/319Use the SampleSet key or the first Sample key in checkpoint wrapper2023-04-04T17:55:50ZYannick DAYERUse the SampleSet key or the first Sample key in checkpoint wrapperUses a sample's key if `key` is not an attribute of the `SampleSet`.
Fixes #190.Uses a sample's key if `key` is not an attribute of the `SampleSet`.
Fixes #190.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/318Replace clapp by clapper.2023-03-01T15:59:45ZYannick DAYERReplace clapp by clapper.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/317[pyproject.toml] Changing documentation link back to master/sphinx2023-02-16T09:57:09ZAndré MAYORAZ[pyproject.toml] Changing documentation link back to master/sphinxAndré MAYORAZAndré MAYORAZhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/316Fix checkpoint wrapper saving in the same dir2023-02-14T14:45:26ZYannick DAYERFix checkpoint wrapper saving in the same dirFixes collisions of samples checkpoint filenames when checkpointing a pipeline.Fixes collisions of samples checkpoint filenames when checkpointing a pipeline.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/315Rc file name change2023-02-17T00:29:00ZAndré MAYORAZRc file name changechange the rc file name to `bobrc.toml` and remove from the catalog the migrated packages documentationchange the rc file name to `bobrc.toml` and remove from the catalog the migrated packages documentationAndré MAYORAZAndré MAYORAZhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/314Fix the annotations loader2023-02-14T10:10:23ZYannick DAYERFix the annotations loaderYannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/313Fix database classes to follow bob.pipelines changes2024-01-08T13:57:33ZYannick DAYERFix database classes to follow bob.pipelines changesYannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/312Fix the vuln commands to use subject_id, not template_id2023-02-13T16:35:57ZYannick DAYERFix the vuln commands to use subject_id, not template_idFixes #189.Fixes #189.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/311Do not wrap a pipeline's transformer with checkpoint if it is already wrapped2023-02-14T14:24:56ZYannick DAYERDo not wrap a pipeline's transformer with checkpoint if it is already wrappedTests each step of a pipeline transformer before wrapping it with `CheckpointWrapper`.
Fixes bob.pipelines#45.Tests each step of a pipeline transformer before wrapping it with `CheckpointWrapper`.
Fixes bob.pipelines#45.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/310Bob Documentation in intersphinx catalog2022-12-22T17:57:21ZAndré MAYORAZBob Documentation in intersphinx catalogAuto-intershpinx doesn't seem to find itself the correct meta-data for bob packages if they are not included as a dependency in the `pyproject.toml`, so the links of those packages' documentation are put in the catalog.Auto-intershpinx doesn't seem to find itself the correct meta-data for bob packages if they are not included as a dependency in the `pyproject.toml`, so the links of those packages' documentation are put in the catalog.André MAYORAZAndré MAYORAZhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/309Allow uninstantiated class to get protocols2022-11-12T01:36:35ZYannick DAYERAllow uninstantiated class to get protocolsYannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/308Move the dummy config files to src2022-11-10T19:16:52ZYannick DAYERMove the dummy config files to srcDoing so makes them available to other packages, like `bob.bio.face`.Doing so makes them available to other packages, like `bob.bio.face`.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/307Resolve "Switch to new CI/CD configuration"2022-11-10T10:11:49ZAndré MAYORAZResolve "Switch to new CI/CD configuration"Fixes #188Fixes #188Roadmap to the major version of Bob 12André MAYORAZAndré MAYORAZhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/306Fix the ScoreWriter and sparse db scoring all vs all2022-11-11T23:51:43ZYannick DAYERFix the ScoreWriter and sparse db scoring all vs allFixed the `ScoreWriter` classes looking for a `key` attribute.
Fixed the name of the `for_matching.csv` file.Fixed the `ScoreWriter` classes looking for a `key` attribute.
Fixed the name of the `for_matching.csv` file.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/305Fix the compare-samples command and add tests2022-08-22T09:05:28ZYannick DAYERFix the compare-samples command and add testsFixes #187.Fixes #187.Yannick DAYERYannick DAYERhttps://gitlab.idiap.ch/bob/bob.bio.base/-/merge_requests/304Add a command to train a pipeline2022-09-23T18:58:08ZYannick DAYERAdd a command to train a pipelineExecutes only the training part of a `PipelineSimple`, or fits a `sklearn.pipeline`.
Adds the possibility to split the training with multiple data chunks.Executes only the training part of a `PipelineSimple`, or fits a `sklearn.pipeline`.
Adds the possibility to split the training with multiple data chunks.Yannick DAYERYannick DAYER