From 8ab1612d68e11c2952b458582305568efac86435 Mon Sep 17 00:00:00 2001
From: Tiago Freitas Pereira <tiagofrepereira@gmail.com>
Date: Fri, 22 Apr 2016 16:52:05 +0200
Subject: [PATCH] Solving issue #14 and added the argument --environment
---
bob/bio/base/tools/command_line.py | 2 ++
bob/bio/base/tools/grid.py | 5 +++++
2 files changed, 7 insertions(+)
diff --git a/bob/bio/base/tools/command_line.py b/bob/bio/base/tools/command_line.py
index d584083a..40e58832 100644
--- a/bob/bio/base/tools/command_line.py
+++ b/bob/bio/base/tools/command_line.py
@@ -139,6 +139,8 @@ def command_line_parser(description=__doc__, exclude_resources_from=[]):
help = "If given, missing files will not stop the processing; this is helpful if not all files of the database can be processed; missing scores will be NaN.")
flag_group.add_argument('-r', '--parallel', type=int,
help = 'This flag is a shortcut for running the commands on the local machine with the given amount of parallel threads; equivalent to --grid bob.bio.base.grid.Grid("local", number_of_parallel_threads=X) --run-local-scheduler --stop-on-failure.')
+
+ flag_group.add_argument('-s', '--environment', dest='env', nargs='*', default=[], help='Passes specific environment variables to the job.')
return {
'main' : parser,
diff --git a/bob/bio/base/tools/grid.py b/bob/bio/base/tools/grid.py
index 05cde15c..cb04d88a 100644
--- a/bob/bio/base/tools/grid.py
+++ b/bob/bio/base/tools/grid.py
@@ -49,6 +49,8 @@ class GridSubmission:
if args.grid is not None:
assert isinstance(args.grid, grid.Grid)
+
+ self.env = args.env #Fetching the enviroment variable
# find, where jman is installed
jmans = bob.extension.find_executable('jman', prefixes = ['bin'])
@@ -93,6 +95,9 @@ class GridSubmission:
# submit the job to the job manager
if not self.args.dry_run:
+ if(self.env is not None):
+ kwargs['env'] = self.env
+
job_id = self.job_manager.submit(
command_line = cmd,
name = name,
--
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