From 1a1ae499f4291e349db0460584fa90d5bf657778 Mon Sep 17 00:00:00 2001
From: Amir Mohammadi <amir.mohammadi@idiap.ch>
Date: Mon, 29 Aug 2016 12:16:51 +0200
Subject: [PATCH] Update from scratch script to pin versions.
---
bootstrap-conda.sh | 2 +-
from-list.sh | 6 -----
from-scratch.sh | 64 ++++++++++++++++++++++++----------------------
3 files changed, 34 insertions(+), 38 deletions(-)
diff --git a/bootstrap-conda.sh b/bootstrap-conda.sh
index 539eb10..80d6fb0 100755
--- a/bootstrap-conda.sh
+++ b/bootstrap-conda.sh
@@ -32,5 +32,5 @@ if [ ! -x ${CONDA} ]; then
${CONDA} config --add channels conda-forge
fi
-echo "[>>] Updating root environment..."
+echo "[>>] Updating conda in the root environment..."
${CONDA} update --yes -n root conda
diff --git a/from-list.sh b/from-list.sh
index dc8bf62..718b552 100755
--- a/from-list.sh
+++ b/from-list.sh
@@ -12,12 +12,6 @@ NAME=$2
FILE=$3
CONDA=${BASEDIR}/bin/conda
-if [ "$(uname)" == "Darwin" ]; then
- ARCH="MacOSX-x86_64"
-else
- ARCH="Linux-x86_64"
-fi
-
# Re-create the environment
if [ ! -d ${BASEDIR}/envs/${NAME} ]; then
${CONDA} create --yes -n ${NAME} --file ${FILE}
diff --git a/from-scratch.sh b/from-scratch.sh
index 6bf8a60..1ab26a4 100755
--- a/from-scratch.sh
+++ b/from-scratch.sh
@@ -1,6 +1,8 @@
#!/usr/bin/env bash
# Wed 17 Aug 2016 13:50:29 CEST
+set -e
+
if [ "${#}" != 3 ]; then
echo "usage: `basename $0` <basedir> <name> <python-version>"
echo "example: `basename $0` /opt/conda bob-devel-py34 3.4"
@@ -11,49 +13,49 @@ BASEDIR=$1
NAME=$2
PYTHON_VERSION=$3
CONDA=${BASEDIR}/bin/conda
-MINICONDA=${HOME}/Downloads/miniconda.sh
if [ ! -d ${BASEDIR}/envs/${NAME} ]; then
echo "[>>] Creating environment ${NAME} for python ${PYTHON_VERSION}..."
- ${CONDA} create --yes -n ${NAME} python=${PYTHON_VERSION}
+ ${CONDA} create --yes -n ${NAME} --override-channels --channel defaults python=${PYTHON_VERSION}
fi
# For a complete list of dependencies, please read:
# https://gitlab.idiap.ch/bob/bob/wikis/Dependencies
echo "[>>] Installing Bob dependencies on ${NAME}..."
-${CONDA} install --yes -n ${NAME} \
+${CONDA} install --yes -n ${NAME} --override-channels -c defaults \
nomkl \
- boost \
cmake \
- coverage \
- sphinx \
- sphinx_rtd_theme \
- cython \
+ coverage=4.2 \
+ sphinx=1.4.1 \
+ sphinx_rtd_theme=0.1.9 \
+ cython=0.24 \
docopt \
- ffmpeg \
- giflib \
- hdf5 \
- ipdb \
- ipython \
- jpeg \
- libblitz \
- libmatio \
- libpng \
- libsvm \
- libtiff \
- matplotlib \
- nose \
- numexpr \
- numpy \
- opencv \
- pillow \
+ hdf5=1.8.17 \
+ ipython=4.2.0 \
+ jpeg=8d \
+ libpng=1.6.22 \
+ libtiff=4.0.6 \
+ matplotlib=1.5.1 \
+ nose=1.3.7 \
+ numexpr=2.6.0 \
+ numpy=1.11.1 \
+ pillow=3.2.0 \
pkg-config \
- psutil \
- scikit-learn \
- scipy \
- sox \
- sqlalchemy \
- vlfeat
+ psutil=4.3.0 \
+ scikit-learn=0.17.1 \
+ scipy=0.17.1 \
+ sqlalchemy=1.0.13
+
+${CONDA} install --yes -n ${NAME} --override-channels -c defaults -c conda-forge \
+ boost=1.61.0 \
+ ffmpeg=2.8.6 \
+ giflib=5.1.2 \
+ ipdb \
+ libblitz=0.10 \
+ libmatio=1.5.6 \
+ libsvm=3.21 \
+ sox=14.4.2 \
+ vlfeat=0.9.20
echo "[>>] Bye!"
exit 0
--
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