.. vim: set fileencoding=utf-8 : .. Copyright (c) 2016 Idiap Research Institute, http://www.idiap.ch/ .. .. Contact: beat.support@idiap.ch .. .. .. .. This file is part of the beat.web module of the BEAT platform. .. .. .. .. Commercial License Usage .. .. Licensees holding valid commercial BEAT licenses may use this file in .. .. accordance with the terms contained in a written agreement between you .. .. and Idiap. For further information contact tto@idiap.ch .. .. .. .. Alternatively, this file may be used under the terms of the GNU Affero .. .. Public License version 3 as published by the Free Software and appearing .. .. in the file LICENSE.AGPL included in the packaging of this file. .. .. The BEAT platform is distributed in the hope that it will be useful, but .. .. WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY .. .. or FITNESS FOR A PARTICULAR PURPOSE. .. .. .. .. You should have received a copy of the GNU Affero Public License along .. .. with the BEAT platform. If not, see http://www.gnu.org/licenses/. .. ============================================ Biometrics Evaluation and Testing Platform ============================================ This package contains the source code for the web components of the BEAT platform. Installation ------------ Here is a recipe to get you started:: $ python bootstrap-buildout.py $ ./bin/buildout These 2 commands should download and install all non-installed dependencies and get you a fully operational test and development environment. .. note:: The python shell used in the first line of the previous command set determines the python interpreter that will be used for all scripts developed inside this package. If you are on the Idiap filesystem, you may use ``/idiap/project/beat/environments/staging/usr/bin/python`` to bootstrap this package instead. It contains the same setup deployed at the final BEAT machinery. .. tip:: If you'd like to **speed-up** the installation, it is strongly advised you prepare a preset virtual environment (see the virtualenv_ package) with all required dependencies, so that ``./bin/buildout`` does not download and installs all of them every time you cleanup. This technique should allow you to quickly clean-up and re-start your working environment which is useful during development. In order to fetch currently needed dependencies, run:: $ ./bin/buildout #to setup once $ ./bin/pip freeze > requirements.txt Examine the file ``requirements.txt`` and remove packages you are either developing locally (e.g., all that are under ``src``) or that you think you don't need. The command ``pip freeze`` reports all installed packages and not only those which are needed by your project. If the Python prompt you used for bootstrapping already had a good set of packages installed, you may see them there. Once you have a satisfying ``requirements.txt`` file, you may proceed to recreate a virtualenv_ you'll use for your development. Just call:: $ virtualenv ~/work/beat-env #--system-site-packages To create the virtual environment. This new environment does not contain system packages by default. You may override that by specifying ``--system-site-packages`` as suggested above. Then, install the required packages on your new virtual environment:: $ ~/work/beat-env/bin/pip install -r requirements.txt After that step is done, your virtual environment is ready for deployment. You may now start from scratch to develop ``beat.web`` taking as base the Python interpreter on your virtualenv_:: $ cd beat.web $ git clean -fdx #full clean-up $ ~/work/beat-env/bin/python bootstrap-buildout.py $ ./bin/buildout You'll realize the buildout step now takes considerably less time and you may repeat this last step as much as needed. ``pip`` is a very flexible tool and you may use it to manage the virtualenv_ installing and removing packages as needed. Documentation ------------- Our documentation project is divided in 3 parts. The user guide is the only one which is automatically built as part of the ``buildout`` procedure. The API and administrators guide needs to be manually compiled if required. To build the API documentation, just do:: $ ./bin/sphinx-apidoc --separate -d 2 --output=doc/api/api beat beat/web/*/migrations beat/web/*/tests $ ./bin/sphinx-build doc/api html/api To build the administrator guide, just do:: $ ./bin/sphinx-build doc/admin html/admin The above commands will build the stated guides, in HTML format, and dump results into your local directory ``html``. You may navigate then to that directory and, with your preferred web browser, open the file ``index.html`` to browse the available documentation. The basic user guide which includes information for users of the platform, is built automatically upon ``buildout``. If you wish to build it and place it alongside the other guides, you may do it as well like this:: $ ./bin/sphinx-build doc/user html/user Instantiating a BEAT web server ------------------------------- For a simple (development) web server, the default settings on ``beat/web/settings/settings.py`` should work out of the box. These settings: * Instantiate the web service on the local host under port 8000 (the address will be ``http://127.0.0.1:8000`` * Use an SQLITE3 database named ``django.sql3`` located on the current working directory * Run with full debug output * It sets the working BEAT prefix to ``./prefix`` * A single user, called ``admin`` will be setup into the system If you need to tweak these settings, just edit the file ``beat/web/settings/settings.py``. You may consult the `Django documentation`_ for detailed information on other settings. Once the Django settings are in place, you can run a single command to fully populate a development webserver:: $ ./bin/django install -v1 .. note:: Concerning databases installed by this command, we only explain the platform how to **access** their data. It does not download the raw data for the databases that you must procure yourself through the relevant web sites (checkout the database pages on the Idiap instance of the BEAT platform for details). .. note:: If you need to specify your own path to the directories containing the databases, you could just create a simple JSON file as follows:: { "atnt/1": "/remote/databases/atnt", "banca/2": "/remote/databases/banca" } Then just use the previous script with the option ``--database-root-file``:: $ ./bin/django install -v1 --database-root-file=MYFILE.json By default, paths to the root of all databases are set to match the Idiap Research Institute filesystem organisation. .. note:: For every installed database, you'll need to generate their data indices, which allows the platform to correctly parallelize algorithms. To do so, for every combination of database and version you wish to support, run the following command:: $ ./bin/beat -p web_dynamic_data db index / Replacing the strings ```` by the name of the database you wish to dump the indices for, together with the version in ````. For example, to dump the indices for the AT&T database, version 1, do the following:: $ ./bin/beat -p web_dynamic_data db index atnt/1 Once the contributions and users are in place, you're ready to start the test server:: $ ./bin/django runserver -v3 At this point, your platform can be accessed by typing the URL ``http://127.0.0.1:8000`` in a web browser on the machine the server is running. .. _localhost: Localhost --------- To effectively use your new server and test all aspects of it, you'll also need a scheduler with at least one attached worker that can execute experiments. For most development purposes, a simple 3-node system, with all components running on the current (local) host is sufficient. Here is a recipe to start a simple 3-node system in which the local worker uses the system-wide installed Python interpreter to execute the algorithms. First, make sure the program ``cpulimit`` is available on your system. The BEAT platform uses this program to control slot usage on the scheduling/worker level:: $ cpulimit -h If that is not the case, then you need to install it. Either install a package that is native to your system (e.g. on Debian or Ubuntu platforms) or compile the checked-out version available at ``src/cpulimit``:: $ cd src/cpulimit; $ make $ ./src/cpulimit -h #to test it $ cd ../../bin #go back to the root of beat.web and the into the `bin' dir $ ln -s ../src/cpulimit/src/cpulimit $ cd .. #go back to the root of beat.web Now start the localhost system:: $ ./bin/localhost.py -v ... You may inspect this programs help message for details on its usage and options. Once the localhost system is started and the scheduler is properly configured, you may open a browser window to your `localhost, port 8000 `_, to get started with your locally installed platform. Localhost with ``DEBUG=False`` ============================== If you need to test the RESTful API, it is better to do it without Django throwing you HTML error pages. For that, you'll need to start the Django development server with slightly different settings:: $ ./bin/localhost.py -v --settings=beat.web.settings.nodebug Triggering a Scheduler Reconfiguration ====================================== If you modify the queue configuration on the Django administrative panel, you'll need to notify the scheduler of those changes. You can trigger a scheduler (hot) re-configuration using the following command-line program:: $ ./bin/django qconf .. note:: Optionally, you may also visit `your local scheduler page `, and hit the (green) button that says "Send configuration to Scheduler". It has the same effect. Unit Testing ------------ After installation, it is possible to run our suite of unit tests. To do so, use:: $ ./bin/django test --settings=beat.web.settings.test -v 2 You may pass filtering criteria to just launch tests for a particular set of ``beat.web`` applications. For example, to run tests only concerning ``beat.web.toolchains``, run:: $ ./bin/django test --settings=beat.web.settings.test -v 2 beat.web.toolchains.tests To measure coverage, you must set an environment variable for nose:: $ NOSE_WITH_COVERAGE=1 NOSE_COVER_PACKAGE=beat.web ./bin/django test --settings=beat.web.settings.test -v 2 .. _snapshot: Local Development Server ------------------------ It is easy to quickly setup a local system for development, taking as base the current state of a production system. 1. Before starting, make sure you have gone through, at least once, over the localhost_ instructions above. It explains the very basic setup required for a complete development environment. 2. Dump and back-up your current **production** BEAT database:: [production]$ ./bin/django backup 3. [Optional] If you have made important modifications between the contents available at your production server and your currently checked-out source, you'll need to run Django migrations on data imported from the production server. If you need to do this, make sure you don't have unapplied commits to your local **development** package and reset it to the production tag:: [development]$ git checkout .. note:: You can figure you the production tag by looking at the footer of the BEAT website. The corresponding tag name is found by prefixing a ``v`` before the version number. For example, the tag for version ``0.8.2`` of the platform is ``v0.8.2``. Also make sure to revert all dependent packages, so as to recreate the state of the database schema as on the production site. 4. Remove the current local development database so that the restore operation can start from scratch:: [development]$ rm -rf django.sql3 web_dynamic_data 5. Copy the backup tarball from the production server and restore it locally:: [development]$ scp root@beatweb:backups/.tar.bz2 [development]$ ./bin/django restore .tar.bz2 At this point, you have recreated a copy of your production system locally, on your SQLite3 database. 6. Reset queue configuration to allow for local running. You may, optionally, reset the queue configuration of your installation so that the environment you have is compatible with your development machine, so that you can immediately run experiments locally. To do so, use the ``qsetup`` Django command:: [development]$ ./bin/django qsetup --reset 7. Apply migrations:: $ ./bin/django migrate At this point, you should have a complete development setup with all elements available on the production system installed locally. This system is fully capable of running experiments locally using your machine. Start a full system using ``localhost.py`` as explained on the localhost_ section above. Testing Django Migrations ------------------------- Django migrations, introduced in version 1.7, is a useful feature for automatically migrating your database to new model schemas, if you get it right. Here is a recipe to make sure your migrations will work on your production system, allowing for quick and repetitive test/fix cycles. The key idea is that we follow the setup for the snapshot_ and then, locally backup our database and prefix so that we can quickly reproduce the migration test loop. 1. Make sure you go through the snapshot_ instructions above (**up to step 6 only**). 2. Make a copy of the SQLite3 database:: $ cp -a django.sql3 django.sql3.backup This backup will allow you to quickly test the migrations w/o having to checkout the production version anymore. Also, create a temporary git repository of ``web_dynamic_data``, so you can cross-check changes and reset it in case of problems:: $ cd web_dynamic_data $ git init . $ git add . $ git commit -m "Initial commit" $ cd .. 3. Go back to the HEAD or branch you were developping before:: $ git checkout HEAD 4. Here is how to test/fix your migrations: a. Run "django migrate":: $ ./bin/django migrate b. Check your database by visually inspecting it on the django web admin or by manually dumping it. c. If a problem is detected, fix it and revert the state:: $ cp -af django.sql3.backup django.sql3 $ cd web_dynamic_data && git reset --hard HEAD && git clean -fdx . & cd .. .. note:: Tip: Write the above lines in a shell script so it is easy to repeat. Go back to a. and restart. Javascript Management with Node.js/Bower ---------------------------------------- We manage javascript external packages with the help of Bower_. If you'd like to include more packages that will statically served with the Django web app, please consider including them at the appropriate section of ``buildout.cfg``. The included recipes will also download and install executables for ``uglifyjs``, ``grunt``, ``csslint`` and ``jshint``, which can be useful for JS development. Issues ------ If you find problems concerning this package, please post a message to our `group mailing list`_. Currently open issues can be tracked at `our gitlab page`_. .. Place here references to all citations in lower case .. _django documentation: https://docs.djangoproject.com .. _pip: http://pypi.python.org/pypi/pip .. _easy_install: http://pypi.python.org/pypi/setuptools .. _zc.buildout: http://pypi.python.org/pypi/zc.buildout .. _virtualenv: http://pypi.python.org/pypi/virtualenv .. _group mailing list: https://groups.google.com/d/forum/beat-devel .. _our gitlab page: https://gitlab.idiap.ch/biometric/beat.web/issues .. _bower: http://bower.io